Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm42443-201ENSMUST00000198084 1155 ntBASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Gm45196-201ENSMUST00000206751 825 ntBASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Gm38077-201ENSMUST00000193657 3245 ntBASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Gm8177-201ENSMUST00000181591 1336 ntBASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Gm11590-201ENSMUST00000118999 1455 ntBASIC7.67□□□□□ -1.18
Nup88Q8CEC0 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Nup88Q8CEC0 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Nup88Q8CEC0 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Nup88Q8CEC0 Gm37254-201ENSMUST00000193542 3901 ntBASIC7.66□□□□□ -1.18
Nup88Q8CEC0 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
Nup88Q8CEC0 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Nup88Q8CEC0 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC7.66□□□□□ -1.18
Nup88Q8CEC0 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Nup88Q8CEC0 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Nup88Q8CEC0 AC139350.2-201ENSMUST00000226508 2331 ntBASIC7.66□□□□□ -1.18
Nup88Q8CEC0 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Nup88Q8CEC0 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC7.66□□□□□ -1.18
Nup88Q8CEC0 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC7.66□□□□□ -1.18
Nup88Q8CEC0 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Nup88Q8CEC0 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC7.66□□□□□ -1.18
Nup88Q8CEC0 Gm14772-201ENSMUST00000116562 514 ntBASIC7.66□□□□□ -1.18
Nup88Q8CEC0 Gm13462-201ENSMUST00000121472 961 ntBASIC7.66□□□□□ -1.18
Nup88Q8CEC0 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Nup88Q8CEC0 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Nup88Q8CEC0 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC7.66□□□□□ -1.18
Nup88Q8CEC0 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Nup88Q8CEC0 Gm10410-201ENSMUST00000180138 384 ntBASIC7.66□□□□□ -1.18
Nup88Q8CEC0 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Nup88Q8CEC0 Gm26898-201ENSMUST00000181678 384 ntBASIC7.66□□□□□ -1.18
Nup88Q8CEC0 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC7.66□□□□□ -1.18
Nup88Q8CEC0 Gm43576-201ENSMUST00000197937 871 ntBASIC7.66□□□□□ -1.18
Nup88Q8CEC0 Gm8190-201ENSMUST00000199603 586 ntBASIC7.66□□□□□ -1.18
Nup88Q8CEC0 Gm17918-201ENSMUST00000205315 574 ntBASIC7.66□□□□□ -1.18
Nup88Q8CEC0 CT030175.1-201ENSMUST00000220822 408 ntBASIC7.66□□□□□ -1.18
Nup88Q8CEC0 Gm8607-201ENSMUST00000221864 431 ntBASIC7.66□□□□□ -1.18
Nup88Q8CEC0 AC132833.4-201ENSMUST00000228313 203 ntBASIC7.66□□□□□ -1.18
Nup88Q8CEC0 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Nup88Q8CEC0 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Nup88Q8CEC0 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
Nup88Q8CEC0 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Nup88Q8CEC0 Gm28392-201ENSMUST00000077630 393 ntBASIC7.66□□□□□ -1.18
Nup88Q8CEC0 Gm22684-201ENSMUST00000082849 132 ntBASIC7.66□□□□□ -1.18
Nup88Q8CEC0 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
Nup88Q8CEC0 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC7.66□□□□□ -1.18
Nup88Q8CEC0 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Nup88Q8CEC0 Gm43128-201ENSMUST00000202212 1621 ntBASIC7.66□□□□□ -1.18
Nup88Q8CEC0 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Nup88Q8CEC0 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Nup88Q8CEC0 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Nup88Q8CEC0 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
Nup88Q8CEC0 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Nup88Q8CEC0 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Nup88Q8CEC0 Gm12242-201ENSMUST00000118824 738 ntBASIC7.65□□□□□ -1.18
Nup88Q8CEC0 Gm12140-201ENSMUST00000121214 544 ntBASIC7.65□□□□□ -1.18
Nup88Q8CEC0 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC7.65□□□□□ -1.18
Nup88Q8CEC0 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Nup88Q8CEC0 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Nup88Q8CEC0 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Nup88Q8CEC0 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC7.65□□□□□ -1.18
Nup88Q8CEC0 Gm8183-201ENSMUST00000183134 980 ntBASIC7.65□□□□□ -1.18
Nup88Q8CEC0 Gm27299-201ENSMUST00000184593 103 ntBASIC7.65□□□□□ -1.18
Nup88Q8CEC0 Gm27601-201ENSMUST00000184794 127 ntBASIC7.65□□□□□ -1.18
Nup88Q8CEC0 Gm29160-201ENSMUST00000190094 699 ntBASIC7.65□□□□□ -1.18
Nup88Q8CEC0 Gm38156-201ENSMUST00000194601 2260 ntBASIC7.65□□□□□ -1.18
Nup88Q8CEC0 Gm19088-201ENSMUST00000198800 566 ntBASIC7.65□□□□□ -1.18
Nup88Q8CEC0 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Nup88Q8CEC0 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC7.65□□□□□ -1.18
Nup88Q8CEC0 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Nup88Q8CEC0 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC7.65□□□□□ -1.18
Nup88Q8CEC0 AC107663.1-201ENSMUST00000224257 468 ntBASIC7.65□□□□□ -1.18
Nup88Q8CEC0 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC7.65□□□□□ -1.18
Nup88Q8CEC0 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Nup88Q8CEC0 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Nup88Q8CEC0 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Nup88Q8CEC0 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Nup88Q8CEC0 Mir138-1-201ENSMUST00000083480 99 ntBASIC7.65□□□□□ -1.18
Nup88Q8CEC0 Mir196a-1-201ENSMUST00000083612 102 ntBASIC7.65□□□□□ -1.18
Nup88Q8CEC0 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Nup88Q8CEC0 Gm37183-201ENSMUST00000191712 3405 ntBASIC7.65□□□□□ -1.19
Nup88Q8CEC0 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Nup88Q8CEC0 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Nup88Q8CEC0 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Nup88Q8CEC0 Gm43789-201ENSMUST00000199275 2472 ntBASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Gm37033-201ENSMUST00000193199 7350 ntBASIC7.64□□□□□ -1.19
Nup88Q8CEC0 Gm45117-201ENSMUST00000207250 1774 ntBASIC7.64□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms