Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Vps53Q8CCB4 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Gm37518-201ENSMUST00000194930 2603 ntBASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Vps53Q8CCB4 AC165260.6-206ENSMUST00000223884 3698 ntBASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Vps53Q8CCB4 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Gm15216-201ENSMUST00000118058 277 ntBASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Gm7658-201ENSMUST00000119064 1124 ntBASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Gm15349-201ENSMUST00000121154 204 ntBASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Vps53Q8CCB4 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Gm17711-201ENSMUST00000172028 237 ntBASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Gm29470-201ENSMUST00000188007 696 ntBASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Vps53Q8CCB4 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Gm23011-202ENSMUST00000197855 275 ntBASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Gm43141-201ENSMUST00000199695 274 ntBASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Gm9367-201ENSMUST00000205703 546 ntBASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC7.72□□□□□ -1.17
Vps53Q8CCB4 AC159886.1-201ENSMUST00000217099 1091 ntBASIC7.72□□□□□ -1.17
Vps53Q8CCB4 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Vps53Q8CCB4 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC7.72□□□□□ -1.17
Vps53Q8CCB4 AV026068-218ENSMUST00000223980 575 ntBASIC7.72□□□□□ -1.17
Vps53Q8CCB4 AC154730.1-201ENSMUST00000227874 816 ntBASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Vps53Q8CCB4 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Gm31049-201ENSMUST00000201516 1302 ntBASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Vps53Q8CCB4 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC7.72□□□□□ -1.17
Vps53Q8CCB4 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC7.72□□□□□ -1.17
Vps53Q8CCB4 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC7.71□□□□□ -1.17
Vps53Q8CCB4 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.17
Vps53Q8CCB4 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.17
Vps53Q8CCB4 Gm43330-201ENSMUST00000199706 2153 ntBASIC7.71□□□□□ -1.17
Vps53Q8CCB4 Gm42940-201ENSMUST00000200361 2362 ntBASIC7.71□□□□□ -1.17
Vps53Q8CCB4 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Vps53Q8CCB4 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Vps53Q8CCB4 AU020206-202ENSMUST00000206358 3009 ntBASIC7.71□□□□□ -1.17
Vps53Q8CCB4 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.17
Vps53Q8CCB4 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Vps53Q8CCB4 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
Vps53Q8CCB4 AC122346.1-201ENSMUST00000225266 3732 ntBASIC7.71□□□□□ -1.17
Vps53Q8CCB4 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Vps53Q8CCB4 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Gm22374-201ENSMUST00000104583 132 ntBASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Gm9506-201ENSMUST00000118516 320 ntBASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Gm4992-201ENSMUST00000120256 768 ntBASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Gm6451-201ENSMUST00000121488 717 ntBASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Gm5809-201ENSMUST00000121854 529 ntBASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Gm13237-201ENSMUST00000122151 635 ntBASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Rps12l1-201ENSMUST00000183090 399 ntBASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Gm37177-201ENSMUST00000193768 417 ntBASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Gm37285-201ENSMUST00000194465 1139 ntBASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Gm43748-201ENSMUST00000202329 1233 ntBASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Gm8679-201ENSMUST00000210651 1036 ntBASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Gm17950-201ENSMUST00000214617 646 ntBASIC7.71□□□□□ -1.18
Vps53Q8CCB4 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC7.71□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms