Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Gm25244-201ENSMUST00000178089 132 ntBASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Gm27853-201ENSMUST00000184176 250 ntBASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Ighv1-30-201ENSMUST00000194082 349 ntBASIC6.61□□□□□ -1.35
Trub1Q8C0D0 AC151967.1-201ENSMUST00000198146 76 ntBASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Gm44225-201ENSMUST00000203582 186 ntBASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Gm8479-201ENSMUST00000203825 718 ntBASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Gm44856-201ENSMUST00000206639 304 ntBASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Gm15732-201ENSMUST00000079794 480 ntBASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Gm10205-201ENSMUST00000087431 234 ntBASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Olfr687-201ENSMUST00000098154 938 ntBASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Trub1Q8C0D0 CT009757.4-201ENSMUST00000221520 2541 ntBASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Gm37142-201ENSMUST00000193718 3110 ntBASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Gm14245-201ENSMUST00000118939 1843 ntBASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Gm37186-201ENSMUST00000195629 2861 ntBASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Gm44068-201ENSMUST00000204049 2128 ntBASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Trub1Q8C0D0 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Trub1Q8C0D0 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Trub1Q8C0D0 Gm4073-201ENSMUST00000176792 3500 ntBASIC6.6□□□□□ -1.35
Trub1Q8C0D0 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Trub1Q8C0D0 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC6.6□□□□□ -1.35
Trub1Q8C0D0 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Trub1Q8C0D0 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Trub1Q8C0D0 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Trub1Q8C0D0 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC6.6□□□□□ -1.35
Trub1Q8C0D0 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Trub1Q8C0D0 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Trub1Q8C0D0 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Trub1Q8C0D0 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Trub1Q8C0D0 Gm8855-201ENSMUST00000118888 878 ntBASIC6.6□□□□□ -1.35
Trub1Q8C0D0 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC6.6□□□□□ -1.35
Trub1Q8C0D0 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Trub1Q8C0D0 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Trub1Q8C0D0 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC6.6□□□□□ -1.35
Trub1Q8C0D0 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Trub1Q8C0D0 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Trub1Q8C0D0 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC6.6□□□□□ -1.35
Trub1Q8C0D0 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC6.6□□□□□ -1.35
Trub1Q8C0D0 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Trub1Q8C0D0 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Trub1Q8C0D0 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
Trub1Q8C0D0 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC6.6□□□□□ -1.35
Trub1Q8C0D0 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Trub1Q8C0D0 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Trub1Q8C0D0 Gm27601-201ENSMUST00000184794 127 ntBASIC6.6□□□□□ -1.35
Trub1Q8C0D0 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC6.6□□□□□ -1.35
Trub1Q8C0D0 AC122844.1-201ENSMUST00000195971 107 ntBASIC6.6□□□□□ -1.35
Trub1Q8C0D0 Gm42963-201ENSMUST00000202943 1217 ntBASIC6.6□□□□□ -1.35
Trub1Q8C0D0 Gm43906-201ENSMUST00000203194 906 ntBASIC6.6□□□□□ -1.35
Trub1Q8C0D0 Gm30694-201ENSMUST00000209278 1230 ntBASIC6.6□□□□□ -1.35
Trub1Q8C0D0 AC135353.1-201ENSMUST00000215330 630 ntBASIC6.6□□□□□ -1.35
Trub1Q8C0D0 AC154861.1-201ENSMUST00000223767 800 ntBASIC6.6□□□□□ -1.35
Trub1Q8C0D0 AC154431.2-201ENSMUST00000225215 1055 ntBASIC6.6□□□□□ -1.35
Trub1Q8C0D0 Gpr87-201ENSMUST00000056898 1080 ntBASIC6.6□□□□□ -1.35
Trub1Q8C0D0 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Trub1Q8C0D0 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Trub1Q8C0D0 AC122263.1-201ENSMUST00000228636 2805 ntBASIC6.6□□□□□ -1.35
Trub1Q8C0D0 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC6.6□□□□□ -1.35
Trub1Q8C0D0 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Trub1Q8C0D0 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC6.6□□□□□ -1.35
Trub1Q8C0D0 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Trub1Q8C0D0 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Trub1Q8C0D0 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Trub1Q8C0D0 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Trub1Q8C0D0 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Trub1Q8C0D0 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC6.59□□□□□ -1.35
Trub1Q8C0D0 AC140393.3-201ENSMUST00000228396 1352 ntBASIC6.59□□□□□ -1.35
Trub1Q8C0D0 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Trub1Q8C0D0 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Trub1Q8C0D0 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Trub1Q8C0D0 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Trub1Q8C0D0 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Trub1Q8C0D0 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Trub1Q8C0D0 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC6.59□□□□□ -1.35
Trub1Q8C0D0 Gm22103-201ENSMUST00000116733 121 ntBASIC6.59□□□□□ -1.35
Trub1Q8C0D0 Gm26475-201ENSMUST00000116769 121 ntBASIC6.59□□□□□ -1.35
Trub1Q8C0D0 Gm23620-201ENSMUST00000116812 121 ntBASIC6.59□□□□□ -1.35
Trub1Q8C0D0 Gm25042-201ENSMUST00000116856 121 ntBASIC6.59□□□□□ -1.35
Trub1Q8C0D0 Gm25540-201ENSMUST00000116880 121 ntBASIC6.59□□□□□ -1.35
Trub1Q8C0D0 Gm13740-201ENSMUST00000120590 310 ntBASIC6.59□□□□□ -1.35
Trub1Q8C0D0 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC6.59□□□□□ -1.35
Trub1Q8C0D0 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC6.59□□□□□ -1.35
Trub1Q8C0D0 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC6.59□□□□□ -1.35
Trub1Q8C0D0 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC6.59□□□□□ -1.35
Trub1Q8C0D0 Gm23674-201ENSMUST00000157473 131 ntBASIC6.59□□□□□ -1.35
Trub1Q8C0D0 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC6.59□□□□□ -1.35
Trub1Q8C0D0 Gm23550-201ENSMUST00000179003 121 ntBASIC6.59□□□□□ -1.35
Trub1Q8C0D0 Gm25123-201ENSMUST00000179154 121 ntBASIC6.59□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms