Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Ikbkg-203ENSMUST00000114127 3332 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim35Q8C006 Pcdhb8-201ENSMUST00000051163 3334 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Trim35Q8C006 Adcy9-202ENSMUST00000117801 4507 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim35Q8C006 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Trim35Q8C006 Cwc22-203ENSMUST00000111819 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim35Q8C006 Pnpla1os-201ENSMUST00000146779 3946 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trim35Q8C006 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim35Q8C006 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim35Q8C006 Msl3-202ENSMUST00000112137 2316 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trim35Q8C006 Zfp410-208ENSMUST00000222258 2329 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trim35Q8C006 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Trim35Q8C006 Stam-201ENSMUST00000028050 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim35Q8C006 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trim35Q8C006 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Trim35Q8C006 Optn-201ENSMUST00000027986 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim35Q8C006 Tenm1-201ENSMUST00000016294 8365 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim35Q8C006 Gm33035-201ENSMUST00000219854 1718 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trim35Q8C006 Duxbl1-201ENSMUST00000049793 2266 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim35Q8C006 Gm37161-201ENSMUST00000191994 2697 ntBASIC9.34□□□□□ -0.91
Trim35Q8C006 Gm38383-201ENSMUST00000194131 2660 ntBASIC9.34□□□□□ -0.91
Trim35Q8C006 Rnf183-202ENSMUST00000107454 1407 ntAPPRIS P1 TSL 3 BASIC9.34□□□□□ -0.91
Trim35Q8C006 Txnip-201ENSMUST00000049093 2795 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim35Q8C006 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Trim35Q8C006 Gm8464-201ENSMUST00000140208 2200 ntBASIC9.34□□□□□ -0.91
Trim35Q8C006 Gm4750-202ENSMUST00000152262 2200 ntBASIC9.34□□□□□ -0.91
Trim35Q8C006 Nit1-201ENSMUST00000111289 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim35Q8C006 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim35Q8C006 Mir875-201ENSMUST00000104698 78 ntBASIC9.34□□□□□ -0.91
Trim35Q8C006 Gm15526-201ENSMUST00000112504 204 ntBASIC9.34□□□□□ -0.91
Trim35Q8C006 Gm11401-201ENSMUST00000117212 344 ntBASIC9.34□□□□□ -0.91
Trim35Q8C006 Gm12188-201ENSMUST00000117387 310 ntBASIC9.34□□□□□ -0.91
Trim35Q8C006 Gm14036-201ENSMUST00000118248 480 ntBASIC9.34□□□□□ -0.91
Trim35Q8C006 Gm15665-201ENSMUST00000119116 847 ntBASIC9.34□□□□□ -0.91
Trim35Q8C006 Gm14182-201ENSMUST00000119334 210 ntBASIC9.34□□□□□ -0.91
Trim35Q8C006 Gm14831-201ENSMUST00000120253 409 ntBASIC9.34□□□□□ -0.91
Trim35Q8C006 Atf1-ps-201ENSMUST00000120608 810 ntBASIC9.34□□□□□ -0.91
Trim35Q8C006 Gm11218-201ENSMUST00000121364 1214 ntBASIC9.34□□□□□ -0.91
Trim35Q8C006 Gm11759-201ENSMUST00000121742 464 ntBASIC9.34□□□□□ -0.91
Trim35Q8C006 Gm25784-201ENSMUST00000122524 81 ntBASIC9.34□□□□□ -0.91
Trim35Q8C006 Gm25804-201ENSMUST00000122785 188 ntBASIC9.34□□□□□ -0.91
Trim35Q8C006 Gm13564-201ENSMUST00000131533 657 ntTSL 3 BASIC9.34□□□□□ -0.91
Trim35Q8C006 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC9.34□□□□□ -0.91
Trim35Q8C006 Snhg17-208ENSMUST00000154242 346 ntTSL 3 BASIC9.34□□□□□ -0.91
Trim35Q8C006 Gm24504-201ENSMUST00000157679 100 ntBASIC9.34□□□□□ -0.91
Trim35Q8C006 Airn-204ENSMUST00000160932 842 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trim35Q8C006 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC9.34□□□□□ -0.91
Trim35Q8C006 Ggta1-209ENSMUST00000164889 1185 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Trim35Q8C006 Sfta2-201ENSMUST00000171166 508 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim35Q8C006 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC9.34□□□□□ -0.91
Trim35Q8C006 Gm26950-201ENSMUST00000182734 498 ntBASIC9.34□□□□□ -0.91
Trim35Q8C006 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC9.34□□□□□ -0.91
Trim35Q8C006 Gm28604-201ENSMUST00000186629 484 ntBASIC9.34□□□□□ -0.91
Trim35Q8C006 Gm28566-201ENSMUST00000186714 484 ntBASIC9.34□□□□□ -0.91
Trim35Q8C006 Gm28194-201ENSMUST00000187412 484 ntBASIC9.34□□□□□ -0.91
Trim35Q8C006 Gm28886-202ENSMUST00000187889 484 ntBASIC9.34□□□□□ -0.91
Trim35Q8C006 Gm28554-202ENSMUST00000189175 484 ntBASIC9.34□□□□□ -0.91
Trim35Q8C006 Gm29213-202ENSMUST00000189703 484 ntBASIC9.34□□□□□ -0.91
Trim35Q8C006 Gm28851-202ENSMUST00000189757 484 ntBASIC9.34□□□□□ -0.91
Trim35Q8C006 Gm28461-201ENSMUST00000190023 484 ntBASIC9.34□□□□□ -0.91
Trim35Q8C006 Gm2474-201ENSMUST00000195162 559 ntBASIC9.34□□□□□ -0.91
Trim35Q8C006 Gm43965-201ENSMUST00000203779 789 ntBASIC9.34□□□□□ -0.91
Trim35Q8C006 Gm44192-201ENSMUST00000204195 556 ntBASIC9.34□□□□□ -0.91
Trim35Q8C006 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC9.34□□□□□ -0.91
Trim35Q8C006 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Trim35Q8C006 Gm39481-201ENSMUST00000210379 512 ntBASIC9.34□□□□□ -0.91
Trim35Q8C006 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC9.34□□□□□ -0.91
Trim35Q8C006 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC9.34□□□□□ -0.91
Trim35Q8C006 AC124739.2-201ENSMUST00000222201 109 ntBASIC9.34□□□□□ -0.91
Trim35Q8C006 AC139750.2-201ENSMUST00000224424 386 ntBASIC9.34□□□□□ -0.91
Trim35Q8C006 AC167013.4-201ENSMUST00000226712 317 ntBASIC9.34□□□□□ -0.91
Trim35Q8C006 Apoc3-201ENSMUST00000034586 526 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim35Q8C006 Gm11437-201ENSMUST00000050771 1239 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim35Q8C006 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC9.34□□□□□ -0.91
Trim35Q8C006 Zswim2-201ENSMUST00000038223 2062 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim35Q8C006 Bcl2l11-201ENSMUST00000019281 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim35Q8C006 F5-201ENSMUST00000086040 7430 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim35Q8C006 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Trim35Q8C006 Arhgef9-207ENSMUST00000113885 4578 ntTSL 5 BASIC9.34□□□□□ -0.91
Trim35Q8C006 Gm43663-201ENSMUST00000198643 1505 ntBASIC9.34□□□□□ -0.91
Trim35Q8C006 Zc3hav1-204ENSMUST00000143702 3364 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trim35Q8C006 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trim35Q8C006 Asb17-201ENSMUST00000044089 2553 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim35Q8C006 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Trim35Q8C006 Vmn1r44-203ENSMUST00000226120 1772 ntBASIC9.34□□□□□ -0.91
Trim35Q8C006 Klhl15-209ENSMUST00000170594 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim35Q8C006 Fras1-201ENSMUST00000036019 15848 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim35Q8C006 Ambra1-202ENSMUST00000045705 5203 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trim35Q8C006 1110002E22Rik-201ENSMUST00000163080 9741 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Trim35Q8C006 Gm7701-201ENSMUST00000163185 1479 ntBASIC9.34□□□□□ -0.91
Trim35Q8C006 Ggt5-201ENSMUST00000072217 4410 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim35Q8C006 Clasp1-220ENSMUST00000191445 4914 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.92
Trim35Q8C006 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC9.34□□□□□ -0.92
Trim35Q8C006 Fam13a-202ENSMUST00000173193 1998 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Trim35Q8C006 Exoc1-203ENSMUST00000113493 3371 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trim35Q8C006 Tc2n-204ENSMUST00000162735 5290 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim35Q8C006 Scml2-204ENSMUST00000087090 2953 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Trim35Q8C006 Tkt-201ENSMUST00000022529 3223 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim35Q8C006 Srcap-207ENSMUST00000187040 10654 ntAPPRIS P2 TSL 5 BASIC9.33□□□□□ -0.92
Trim35Q8C006 Napepld-201ENSMUST00000060899 3724 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim35Q8C006 Hmbox1-209ENSMUST00000176832 1586 ntTSL 5 BASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 122.4 ms