Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC9.07□□□□□ -0.96
Usp47Q8BY87 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Usp47Q8BY87 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Usp47Q8BY87 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Usp47Q8BY87 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Usp47Q8BY87 Gm24434-201ENSMUST00000104081 132 ntBASIC9.07□□□□□ -0.96
Usp47Q8BY87 Gm23311-201ENSMUST00000104152 134 ntBASIC9.07□□□□□ -0.96
Usp47Q8BY87 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC9.07□□□□□ -0.96
Usp47Q8BY87 Gm14294-201ENSMUST00000119749 751 ntBASIC9.07□□□□□ -0.96
Usp47Q8BY87 Gm22530-201ENSMUST00000158820 118 ntBASIC9.07□□□□□ -0.96
Usp47Q8BY87 Gm6611-201ENSMUST00000163830 1272 ntBASIC9.07□□□□□ -0.96
Usp47Q8BY87 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Usp47Q8BY87 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC9.07□□□□□ -0.96
Usp47Q8BY87 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC9.07□□□□□ -0.96
Usp47Q8BY87 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Usp47Q8BY87 AC114572.1-201ENSMUST00000227262 300 ntBASIC9.07□□□□□ -0.96
Usp47Q8BY87 AC159979.1-201ENSMUST00000227927 342 ntBASIC9.07□□□□□ -0.96
Usp47Q8BY87 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Usp47Q8BY87 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Usp47Q8BY87 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Usp47Q8BY87 AC116476.1-201ENSMUST00000226274 2318 ntBASIC9.07□□□□□ -0.96
Usp47Q8BY87 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Usp47Q8BY87 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC9.07□□□□□ -0.96
Usp47Q8BY87 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC9.07□□□□□ -0.96
Usp47Q8BY87 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm37090-201ENSMUST00000195694 4105 ntBASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm21781-201ENSMUST00000178920 4838 ntBASIC9.06□□□□□ -0.96
Usp47Q8BY87 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Mir678-201ENSMUST00000102114 84 ntBASIC9.06□□□□□ -0.96
Usp47Q8BY87 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm24435-201ENSMUST00000157886 110 ntBASIC9.06□□□□□ -0.96
Usp47Q8BY87 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm23450-201ENSMUST00000178285 91 ntBASIC9.06□□□□□ -0.96
Usp47Q8BY87 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm37604-201ENSMUST00000191749 1272 ntBASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm43392-201ENSMUST00000196560 434 ntBASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm44075-201ENSMUST00000204208 216 ntBASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC9.06□□□□□ -0.96
Usp47Q8BY87 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm42507-201ENSMUST00000201187 2555 ntBASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm18716-201ENSMUST00000204507 1603 ntBASIC9.06□□□□□ -0.96
Usp47Q8BY87 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm10826-201ENSMUST00000215366 3304 ntBASIC9.06□□□□□ -0.96
Usp47Q8BY87 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Usp47Q8BY87 Gm44231-201ENSMUST00000204106 4075 ntBASIC9.05□□□□□ -0.96
Usp47Q8BY87 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Usp47Q8BY87 Olfr521-203ENSMUST00000220001 2254 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Usp47Q8BY87 Wnk1-218ENSMUST00000161512 1426 ntBASIC9.05□□□□□ -0.96
Usp47Q8BY87 Gm38142-201ENSMUST00000194093 3555 ntBASIC9.05□□□□□ -0.96
Usp47Q8BY87 Gm9403-201ENSMUST00000196299 2181 ntBASIC9.05□□□□□ -0.96
Usp47Q8BY87 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC9.05□□□□□ -0.96
Usp47Q8BY87 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Usp47Q8BY87 Gm26410-201ENSMUST00000157670 261 ntBASIC9.05□□□□□ -0.96
Usp47Q8BY87 Gm8895-201ENSMUST00000172300 1223 ntBASIC9.05□□□□□ -0.96
Usp47Q8BY87 Gm27512-201ENSMUST00000175328 126 ntBASIC9.05□□□□□ -0.96
Usp47Q8BY87 Gm17048-201ENSMUST00000179266 847 ntBASIC9.05□□□□□ -0.96
Usp47Q8BY87 Gm21542-201ENSMUST00000182307 993 ntBASIC9.05□□□□□ -0.96
Usp47Q8BY87 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC9.05□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms