Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Clcn1Q64347 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC9.59□□□□□ -0.87
Clcn1Q64347 Gm29383-201ENSMUST00000188284 480 ntBASIC9.59□□□□□ -0.87
Clcn1Q64347 Gm38079-201ENSMUST00000195603 154 ntBASIC9.59□□□□□ -0.87
Clcn1Q64347 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC9.59□□□□□ -0.87
Clcn1Q64347 Gm43849-201ENSMUST00000201086 215 ntBASIC9.59□□□□□ -0.87
Clcn1Q64347 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC9.59□□□□□ -0.87
Clcn1Q64347 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC9.59□□□□□ -0.87
Clcn1Q64347 Gm44989-201ENSMUST00000204749 217 ntBASIC9.59□□□□□ -0.87
Clcn1Q64347 A930014E10Rik-201ENSMUST00000205115 546 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Clcn1Q64347 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC9.59□□□□□ -0.87
Clcn1Q64347 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC9.59□□□□□ -0.87
Clcn1Q64347 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC9.59□□□□□ -0.87
Clcn1Q64347 Gm8667-201ENSMUST00000211112 449 ntBASIC9.59□□□□□ -0.87
Clcn1Q64347 Gm45506-201ENSMUST00000211620 280 ntBASIC9.59□□□□□ -0.87
Clcn1Q64347 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC9.59□□□□□ -0.87
Clcn1Q64347 Gm18388-201ENSMUST00000222339 557 ntBASIC9.59□□□□□ -0.87
Clcn1Q64347 CT030705.2-201ENSMUST00000225301 556 ntBASIC9.59□□□□□ -0.87
Clcn1Q64347 AC154283.1-201ENSMUST00000228417 389 ntBASIC9.59□□□□□ -0.87
Clcn1Q64347 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Clcn1Q64347 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC9.59□□□□□ -0.87
Clcn1Q64347 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Clcn1Q64347 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Clcn1Q64347 Gm25582-201ENSMUST00000083412 110 ntBASIC9.59□□□□□ -0.87
Clcn1Q64347 Adgrb3-207ENSMUST00000151309 5448 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Clcn1Q64347 Ikbkg-202ENSMUST00000064407 4530 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Clcn1Q64347 Krt39-202ENSMUST00000107445 1633 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Clcn1Q64347 Gm44800-201ENSMUST00000207510 1855 ntBASIC9.59□□□□□ -0.87
Clcn1Q64347 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Clcn1Q64347 Dclk1-201ENSMUST00000054237 7847 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Clcn1Q64347 Wdfy3-201ENSMUST00000053177 14274 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Clcn1Q64347 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Clcn1Q64347 Gm37460-201ENSMUST00000191796 2249 ntBASIC9.59□□□□□ -0.87
Clcn1Q64347 Slc12a3-205ENSMUST00000212134 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Clcn1Q64347 Gm14442-201ENSMUST00000119690 1736 ntBASIC9.59□□□□□ -0.87
Clcn1Q64347 Vps13b-201ENSMUST00000048646 13757 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Clcn1Q64347 Mpp7-201ENSMUST00000115869 4975 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Clcn1Q64347 Adgrd1-203ENSMUST00000156437 4141 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Clcn1Q64347 Ehhadh-201ENSMUST00000023559 3018 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Clcn1Q64347 Unc79-208ENSMUST00000179002 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Clcn1Q64347 Rlim-202ENSMUST00000121153 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Clcn1Q64347 Gm16758-201ENSMUST00000149552 3848 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Clcn1Q64347 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Clcn1Q64347 Slc7a14-201ENSMUST00000091259 8897 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Clcn1Q64347 Gm43196-201ENSMUST00000201762 2114 ntBASIC9.58□□□□□ -0.88
Clcn1Q64347 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Clcn1Q64347 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Clcn1Q64347 Olfr981-202ENSMUST00000215956 8197 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Clcn1Q64347 Klhl5-205ENSMUST00000204348 3380 ntTSL 5 BASIC9.58□□□□□ -0.88
Clcn1Q64347 Trappc13-201ENSMUST00000022224 2342 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
Clcn1Q64347 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Clcn1Q64347 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC9.58□□□□□ -0.88
Clcn1Q64347 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Clcn1Q64347 Gm12392-201ENSMUST00000118014 938 ntBASIC9.58□□□□□ -0.88
Clcn1Q64347 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC9.58□□□□□ -0.88
Clcn1Q64347 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC9.58□□□□□ -0.88
Clcn1Q64347 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC9.58□□□□□ -0.88
Clcn1Q64347 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Clcn1Q64347 Gm18417-201ENSMUST00000176564 648 ntBASIC9.58□□□□□ -0.88
Clcn1Q64347 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC9.58□□□□□ -0.88
Clcn1Q64347 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Clcn1Q64347 Gm27008-202ENSMUST00000182414 604 ntTSL 3 BASIC9.58□□□□□ -0.88
Clcn1Q64347 Arhgap26-218ENSMUST00000187912 312 ntTSL 5 BASIC9.58□□□□□ -0.88
Clcn1Q64347 Gm29008-201ENSMUST00000189387 298 ntBASIC9.58□□□□□ -0.88
Clcn1Q64347 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC9.58□□□□□ -0.88
Clcn1Q64347 Gm43568-202ENSMUST00000198427 476 ntTSL 3 BASIC9.58□□□□□ -0.88
Clcn1Q64347 Igkv4-77-201ENSMUST00000199410 352 ntBASIC9.58□□□□□ -0.88
Clcn1Q64347 Gm42889-201ENSMUST00000199480 660 ntTSL 3 BASIC9.58□□□□□ -0.88
Clcn1Q64347 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC9.58□□□□□ -0.88
Clcn1Q64347 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Clcn1Q64347 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC9.58□□□□□ -0.88
Clcn1Q64347 AC132384.8-201ENSMUST00000218152 1204 ntBASIC9.58□□□□□ -0.88
Clcn1Q64347 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC9.58□□□□□ -0.88
Clcn1Q64347 Gm9628-201ENSMUST00000222169 725 ntBASIC9.58□□□□□ -0.88
Clcn1Q64347 AC124103.1-201ENSMUST00000227564 1027 ntBASIC9.58□□□□□ -0.88
Clcn1Q64347 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Clcn1Q64347 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Clcn1Q64347 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Clcn1Q64347 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Clcn1Q64347 A130012E19Rik-201ENSMUST00000218674 3135 ntBASIC9.58□□□□□ -0.88
Clcn1Q64347 Gtdc1-201ENSMUST00000049051 2197 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Clcn1Q64347 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Clcn1Q64347 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC9.58□□□□□ -0.88
Clcn1Q64347 Nrxn3-205ENSMUST00000163134 7922 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Clcn1Q64347 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Clcn1Q64347 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC9.58□□□□□ -0.88
Clcn1Q64347 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Clcn1Q64347 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Clcn1Q64347 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC9.58□□□□□ -0.88
Clcn1Q64347 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Clcn1Q64347 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC9.58□□□□□ -0.88
Clcn1Q64347 Tmc2-202ENSMUST00000166774 2667 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Clcn1Q64347 Cep162-201ENSMUST00000093802 7685 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Clcn1Q64347 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Clcn1Q64347 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Clcn1Q64347 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Clcn1Q64347 Srp54a-201ENSMUST00000021407 1515 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Clcn1Q64347 Gabra1-205ENSMUST00000205546 4045 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Clcn1Q64347 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Clcn1Q64347 Prkaa1-202ENSMUST00000228218 4618 ntBASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms