Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm29663-201ENSMUST00000186962 853 ntBASIC7.72□□□□□ -1.17
Vps54Q5SPW0 Gm37189-201ENSMUST00000192131 298 ntBASIC7.72□□□□□ -1.17
Vps54Q5SPW0 Gm38237-201ENSMUST00000193366 376 ntBASIC7.72□□□□□ -1.17
Vps54Q5SPW0 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC7.72□□□□□ -1.17
Vps54Q5SPW0 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Vps54Q5SPW0 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC7.72□□□□□ -1.17
Vps54Q5SPW0 AC160114.2-201ENSMUST00000223021 300 ntBASIC7.72□□□□□ -1.17
Vps54Q5SPW0 AC139197.1-201ENSMUST00000228332 813 ntBASIC7.72□□□□□ -1.17
Vps54Q5SPW0 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC7.72□□□□□ -1.17
Vps54Q5SPW0 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Vps54Q5SPW0 Gm42685-201ENSMUST00000200378 2390 ntBASIC7.72□□□□□ -1.17
Vps54Q5SPW0 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Vps54Q5SPW0 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Vps54Q5SPW0 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Vps54Q5SPW0 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Vps54Q5SPW0 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Vps54Q5SPW0 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Vps54Q5SPW0 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC7.72□□□□□ -1.17
Vps54Q5SPW0 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Vps54Q5SPW0 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Vps54Q5SPW0 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Vps54Q5SPW0 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Vps54Q5SPW0 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Vps54Q5SPW0 AC155710.1-201ENSMUST00000219913 1353 ntBASIC7.71□□□□□ -1.17
Vps54Q5SPW0 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
Vps54Q5SPW0 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
Vps54Q5SPW0 Gm15950-201ENSMUST00000162902 1973 ntBASIC7.71□□□□□ -1.17
Vps54Q5SPW0 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Vps54Q5SPW0 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC7.71□□□□□ -1.17
Vps54Q5SPW0 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
Vps54Q5SPW0 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC7.71□□□□□ -1.17
Vps54Q5SPW0 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC7.71□□□□□ -1.17
Vps54Q5SPW0 AC022682.2-202ENSMUST00000224394 3943 ntBASIC7.71□□□□□ -1.17
Vps54Q5SPW0 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Vps54Q5SPW0 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Vps54Q5SPW0 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Vps54Q5SPW0 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC7.71□□□□□ -1.18
Vps54Q5SPW0 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Vps54Q5SPW0 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Vps54Q5SPW0 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Vps54Q5SPW0 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Vps54Q5SPW0 Gm13400-201ENSMUST00000117436 380 ntBASIC7.71□□□□□ -1.18
Vps54Q5SPW0 Gm12565-201ENSMUST00000119004 649 ntBASIC7.71□□□□□ -1.18
Vps54Q5SPW0 Gm15967-201ENSMUST00000120027 1116 ntBASIC7.71□□□□□ -1.18
Vps54Q5SPW0 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC7.71□□□□□ -1.18
Vps54Q5SPW0 Gm8183-201ENSMUST00000183134 980 ntBASIC7.71□□□□□ -1.18
Vps54Q5SPW0 Gm17847-201ENSMUST00000188261 1127 ntBASIC7.71□□□□□ -1.18
Vps54Q5SPW0 Gm37809-201ENSMUST00000195050 931 ntBASIC7.71□□□□□ -1.18
Vps54Q5SPW0 AC158521.1-202ENSMUST00000224352 645 ntBASIC7.71□□□□□ -1.18
Vps54Q5SPW0 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Vps54Q5SPW0 n-R5s89-201ENSMUST00000083532 104 ntBASIC7.71□□□□□ -1.18
Vps54Q5SPW0 Gm5084-202ENSMUST00000224064 3609 ntBASIC7.71□□□□□ -1.18
Vps54Q5SPW0 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Vps54Q5SPW0 AU020206-202ENSMUST00000206358 3009 ntBASIC7.71□□□□□ -1.18
Vps54Q5SPW0 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Vps54Q5SPW0 Gm37423-201ENSMUST00000194246 3342 ntBASIC7.71□□□□□ -1.18
Vps54Q5SPW0 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Vps54Q5SPW0 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Vps54Q5SPW0 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
Vps54Q5SPW0 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Vps54Q5SPW0 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Vps54Q5SPW0 Gm44186-201ENSMUST00000204118 2752 ntBASIC7.71□□□□□ -1.18
Vps54Q5SPW0 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Vps54Q5SPW0 Obox3-201ENSMUST00000086122 1890 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Vps54Q5SPW0 Yme1l1-201ENSMUST00000028117 4707 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Vps54Q5SPW0 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Vps54Q5SPW0 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
Vps54Q5SPW0 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Vps54Q5SPW0 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Vps54Q5SPW0 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Vps54Q5SPW0 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Vps54Q5SPW0 Gm43279-201ENSMUST00000202376 2512 ntBASIC7.7□□□□□ -1.18
Vps54Q5SPW0 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Vps54Q5SPW0 Gm15016-201ENSMUST00000117300 720 ntBASIC7.7□□□□□ -1.18
Vps54Q5SPW0 Gm14018-201ENSMUST00000119042 455 ntBASIC7.7□□□□□ -1.18
Vps54Q5SPW0 Gm13626-201ENSMUST00000119435 402 ntBASIC7.7□□□□□ -1.18
Vps54Q5SPW0 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Vps54Q5SPW0 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC7.7□□□□□ -1.18
Vps54Q5SPW0 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC7.7□□□□□ -1.18
Vps54Q5SPW0 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC7.7□□□□□ -1.18
Vps54Q5SPW0 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Vps54Q5SPW0 n-R5s209-201ENSMUST00000179494 119 ntBASIC7.7□□□□□ -1.18
Vps54Q5SPW0 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Vps54Q5SPW0 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Vps54Q5SPW0 Gm37770-201ENSMUST00000192855 772 ntBASIC7.7□□□□□ -1.18
Vps54Q5SPW0 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Vps54Q5SPW0 Gm8869-201ENSMUST00000195222 947 ntBASIC7.7□□□□□ -1.18
Vps54Q5SPW0 Gm45196-201ENSMUST00000206751 825 ntBASIC7.7□□□□□ -1.18
Vps54Q5SPW0 AC113031.1-201ENSMUST00000227400 432 ntBASIC7.7□□□□□ -1.18
Vps54Q5SPW0 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Vps54Q5SPW0 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC7.7□□□□□ -1.18
Vps54Q5SPW0 Gm22581-201ENSMUST00000083735 136 ntBASIC7.7□□□□□ -1.18
Vps54Q5SPW0 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Vps54Q5SPW0 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Vps54Q5SPW0 Gm45528-201ENSMUST00000209854 3145 ntBASIC7.7□□□□□ -1.18
Vps54Q5SPW0 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC7.7□□□□□ -1.18
Vps54Q5SPW0 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Vps54Q5SPW0 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC7.7□□□□□ -1.18
Vps54Q5SPW0 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Vps54Q5SPW0 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 111.2 ms