Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col8a1Q00780 Gprasp2-201ENSMUST00000113136 3736 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Col8a1Q00780 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
Col8a1Q00780 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col8a1Q00780 Gm43519-201ENSMUST00000197239 1872 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col8a1Q00780 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Col8a1Q00780 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Col8a1Q00780 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col8a1Q00780 CT025535.2-201ENSMUST00000228572 7441 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Col8a1Q00780 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Col8a1Q00780 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col8a1Q00780 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col8a1Q00780 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 Mir669d-2-201ENSMUST00000116854 86 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 Gm15361-201ENSMUST00000119320 444 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 Gm12587-201ENSMUST00000120180 427 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 Gm14212-201ENSMUST00000122023 826 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC6.18□□□□□ -1.42
Col8a1Q00780 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col8a1Q00780 1700123O12Rik-202ENSMUST00000141312 660 ntTSL 3 BASIC6.18□□□□□ -1.42
Col8a1Q00780 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC6.18□□□□□ -1.42
Col8a1Q00780 Gm15275-201ENSMUST00000154752 347 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 Gm22882-201ENSMUST00000157749 124 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 Gm24962-201ENSMUST00000157917 109 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC6.18□□□□□ -1.42
Col8a1Q00780 Gm17149-201ENSMUST00000164712 375 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 Gm3208-201ENSMUST00000168281 427 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 Gm8305-201ENSMUST00000180022 1195 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 Gm8614-201ENSMUST00000182528 978 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 Gm28594-201ENSMUST00000187022 661 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 Gm29492-201ENSMUST00000187124 457 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 Gm28927-201ENSMUST00000191528 272 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 Gm17952-201ENSMUST00000193914 747 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 Gm43287-201ENSMUST00000197747 600 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 Gm43656-201ENSMUST00000197882 434 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 Gm18747-201ENSMUST00000198129 648 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 Gm31520-201ENSMUST00000203048 733 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC6.18□□□□□ -1.42
Col8a1Q00780 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC6.18□□□□□ -1.42
Col8a1Q00780 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC6.18□□□□□ -1.42
Col8a1Q00780 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC6.18□□□□□ -1.42
Col8a1Q00780 Gm9357-201ENSMUST00000207138 805 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC6.18□□□□□ -1.42
Col8a1Q00780 Gm44571-201ENSMUST00000208092 533 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 Gm45247-201ENSMUST00000210757 309 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 AC156795.1-201ENSMUST00000214655 414 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 AC122901.2-201ENSMUST00000216926 285 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 Gm18040-201ENSMUST00000217922 827 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 AC132587.1-201ENSMUST00000220562 166 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 Gm19047-201ENSMUST00000220922 1099 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 AC154642.1-201ENSMUST00000224173 740 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 CT010480.3-201ENSMUST00000224712 259 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 AC102603.1-201ENSMUST00000227481 584 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 AC144628.1-201ENSMUST00000227943 466 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 AC130547.1-201ENSMUST00000228079 1047 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 AC135086.1-201ENSMUST00000228621 817 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 AC158981.3-202ENSMUST00000228906 523 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Col8a1Q00780 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col8a1Q00780 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Col8a1Q00780 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Col8a1Q00780 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Col8a1Q00780 Gm22971-201ENSMUST00000083305 97 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 AC153564.1-201ENSMUST00000217771 3607 ntTSL 5 BASIC6.18□□□□□ -1.42
Col8a1Q00780 Rassf6-206ENSMUST00000202784 1919 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col8a1Q00780 Gm6786-201ENSMUST00000203165 1915 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 Gm43873-201ENSMUST00000204505 3938 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col8a1Q00780 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col8a1Q00780 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col8a1Q00780 Gm28906-201ENSMUST00000191371 1779 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 Gm6640-201ENSMUST00000120629 1587 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Col8a1Q00780 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col8a1Q00780 Ppp1r9a-204ENSMUST00000168998 2966 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col8a1Q00780 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Col8a1Q00780 Gm45358-201ENSMUST00000209492 2305 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col8a1Q00780 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC6.17□□□□□ -1.42
Col8a1Q00780 AC124421.1-201ENSMUST00000219114 4154 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col8a1Q00780 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col8a1Q00780 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col8a1Q00780 Spag11b-202ENSMUST00000110767 1740 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col8a1Q00780 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm44950-201ENSMUST00000206403 2296 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Olfr115-203ENSMUST00000223366 2273 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Col8a1Q00780 n-R5s1-201ENSMUST00000101925 119 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Col8a1Q00780 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
Col8a1Q00780 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col8a1Q00780 Olfr634-ps1-201ENSMUST00000119267 955 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm14485-201ENSMUST00000119489 493 ntBASIC6.17□□□□□ -1.42
Col8a1Q00780 Gm11387-201ENSMUST00000120266 772 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms