Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Hmgb1P63158 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Hmgb1P63158 Gm37217-201ENSMUST00000194017 3521 ntBASIC7.64□□□□□ -1.19
Hmgb1P63158 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Hmgb1P63158 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC7.63□□□□□ -1.19
Hmgb1P63158 Gm13416-201ENSMUST00000117264 1612 ntBASIC7.63□□□□□ -1.19
Hmgb1P63158 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Hmgb1P63158 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC7.63□□□□□ -1.19
Hmgb1P63158 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Hmgb1P63158 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Hmgb1P63158 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Hmgb1P63158 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Hmgb1P63158 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Hmgb1P63158 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC7.63□□□□□ -1.19
Hmgb1P63158 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Hmgb1P63158 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Hmgb1P63158 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC7.63□□□□□ -1.19
Hmgb1P63158 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Hmgb1P63158 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC7.63□□□□□ -1.19
Hmgb1P63158 Gm14280-201ENSMUST00000138080 1444 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Hmgb1P63158 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC7.63□□□□□ -1.19
Hmgb1P63158 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Hmgb1P63158 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Hmgb1P63158 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Hmgb1P63158 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
Hmgb1P63158 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Hmgb1P63158 Gm15930-201ENSMUST00000156603 2037 ntBASIC7.63□□□□□ -1.19
Hmgb1P63158 Gm8916-201ENSMUST00000119732 949 ntBASIC7.63□□□□□ -1.19
Hmgb1P63158 Sh3d2c-ps1-201ENSMUST00000121498 904 ntBASIC7.63□□□□□ -1.19
Hmgb1P63158 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC7.63□□□□□ -1.19
Hmgb1P63158 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Hmgb1P63158 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Hmgb1P63158 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC7.63□□□□□ -1.19
Hmgb1P63158 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC7.63□□□□□ -1.19
Hmgb1P63158 Gm18709-201ENSMUST00000180564 489 ntBASIC7.63□□□□□ -1.19
Hmgb1P63158 Gm26528-201ENSMUST00000181965 283 ntBASIC7.63□□□□□ -1.19
Hmgb1P63158 Gm26993-201ENSMUST00000182766 789 ntBASIC7.63□□□□□ -1.19
Hmgb1P63158 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Hmgb1P63158 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Hmgb1P63158 Gm36945-201ENSMUST00000192040 864 ntTSL 3 BASIC7.63□□□□□ -1.19
Hmgb1P63158 Gm37977-201ENSMUST00000193096 721 ntBASIC7.63□□□□□ -1.19
Hmgb1P63158 Gm6077-201ENSMUST00000196008 499 ntBASIC7.63□□□□□ -1.19
Hmgb1P63158 Gm43160-201ENSMUST00000196453 421 ntBASIC7.63□□□□□ -1.19
Hmgb1P63158 Gm18430-201ENSMUST00000197534 682 ntBASIC7.63□□□□□ -1.19
Hmgb1P63158 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC7.63□□□□□ -1.19
Hmgb1P63158 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC7.63□□□□□ -1.19
Hmgb1P63158 Gm44258-201ENSMUST00000204925 301 ntBASIC7.63□□□□□ -1.19
Hmgb1P63158 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC7.63□□□□□ -1.19
Hmgb1P63158 Gm45764-201ENSMUST00000213047 571 ntTSL 5 BASIC7.63□□□□□ -1.19
Hmgb1P63158 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC7.63□□□□□ -1.19
Hmgb1P63158 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Hmgb1P63158 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC7.63□□□□□ -1.19
Hmgb1P63158 AC134869.2-201ENSMUST00000225788 421 ntBASIC7.63□□□□□ -1.19
Hmgb1P63158 AC096628.1-201ENSMUST00000226060 641 ntBASIC7.63□□□□□ -1.19
Hmgb1P63158 AC140288.1-201ENSMUST00000226329 503 ntBASIC7.63□□□□□ -1.19
Hmgb1P63158 Cst11-201ENSMUST00000028934 615 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Hmgb1P63158 Tmem213-201ENSMUST00000031851 631 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Hmgb1P63158 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Hmgb1P63158 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Hmgb1P63158 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Hmgb1P63158 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Hmgb1P63158 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Hmgb1P63158 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Hmgb1P63158 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
Hmgb1P63158 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Hmgb1P63158 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Hmgb1P63158 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC7.63□□□□□ -1.19
Hmgb1P63158 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Hmgb1P63158 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC7.62□□□□□ -1.19
Hmgb1P63158 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC7.62□□□□□ -1.19
Hmgb1P63158 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Hmgb1P63158 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Hmgb1P63158 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC7.62□□□□□ -1.19
Hmgb1P63158 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Hmgb1P63158 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC7.62□□□□□ -1.19
Hmgb1P63158 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC7.62□□□□□ -1.19
Hmgb1P63158 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Hmgb1P63158 Gm38276-201ENSMUST00000192446 1343 ntBASIC7.62□□□□□ -1.19
Hmgb1P63158 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
Hmgb1P63158 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Hmgb1P63158 Tmsb4x-203ENSMUST00000112176 698 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Hmgb1P63158 Gm14279-201ENSMUST00000117142 332 ntBASIC7.62□□□□□ -1.19
Hmgb1P63158 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC7.62□□□□□ -1.19
Hmgb1P63158 Gm10243-201ENSMUST00000117571 333 ntBASIC7.62□□□□□ -1.19
Hmgb1P63158 Gm11865-201ENSMUST00000118093 859 ntBASIC7.62□□□□□ -1.19
Hmgb1P63158 Gm14158-201ENSMUST00000118409 308 ntBASIC7.62□□□□□ -1.19
Hmgb1P63158 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC7.62□□□□□ -1.19
Hmgb1P63158 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC7.62□□□□□ -1.19
Hmgb1P63158 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC7.62□□□□□ -1.19
Hmgb1P63158 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC7.62□□□□□ -1.19
Hmgb1P63158 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC7.62□□□□□ -1.19
Hmgb1P63158 Gm23891-201ENSMUST00000158114 138 ntBASIC7.62□□□□□ -1.19
Hmgb1P63158 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC7.62□□□□□ -1.19
Hmgb1P63158 Gm23945-201ENSMUST00000179609 92 ntBASIC7.62□□□□□ -1.19
Hmgb1P63158 Gm17790-201ENSMUST00000191545 1228 ntBASIC7.62□□□□□ -1.19
Hmgb1P63158 Gm37758-201ENSMUST00000194275 629 ntBASIC7.62□□□□□ -1.19
Hmgb1P63158 Gm23011-202ENSMUST00000197855 275 ntBASIC7.62□□□□□ -1.19
Hmgb1P63158 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Hmgb1P63158 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Hmgb1P63158 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms