Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cdh11P55288 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Cdh11P55288 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
Cdh11P55288 Gm44046-201ENSMUST00000203145 2678 ntBASIC5.95□□□□□ -1.46
Cdh11P55288 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Cdh11P55288 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Cdh11P55288 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cdh11P55288 AC154597.1-201ENSMUST00000224095 2713 ntBASIC5.95□□□□□ -1.46
Cdh11P55288 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Cdh11P55288 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Cdh11P55288 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cdh11P55288 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cdh11P55288 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Cdh11P55288 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cdh11P55288 Gm13469-201ENSMUST00000118231 350 ntBASIC5.95□□□□□ -1.46
Cdh11P55288 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Cdh11P55288 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC5.95□□□□□ -1.46
Cdh11P55288 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Cdh11P55288 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Cdh11P55288 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC5.95□□□□□ -1.46
Cdh11P55288 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Cdh11P55288 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cdh11P55288 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC5.95□□□□□ -1.46
Cdh11P55288 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Cdh11P55288 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Cdh11P55288 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Cdh11P55288 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC5.95□□□□□ -1.46
Cdh11P55288 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Cdh11P55288 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC5.95□□□□□ -1.46
Cdh11P55288 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Cdh11P55288 Gm9167-201ENSMUST00000182469 962 ntBASIC5.95□□□□□ -1.46
Cdh11P55288 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cdh11P55288 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Cdh11P55288 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cdh11P55288 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Cdh11P55288 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC5.95□□□□□ -1.46
Cdh11P55288 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Cdh11P55288 Gm7351-201ENSMUST00000210745 580 ntBASIC5.95□□□□□ -1.46
Cdh11P55288 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Cdh11P55288 AC154904.1-201ENSMUST00000219510 312 ntBASIC5.95□□□□□ -1.46
Cdh11P55288 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC5.95□□□□□ -1.46
Cdh11P55288 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC5.95□□□□□ -1.46
Cdh11P55288 CT025667.1-201ENSMUST00000225872 382 ntBASIC5.95□□□□□ -1.46
Cdh11P55288 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Cdh11P55288 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Cdh11P55288 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Cdh11P55288 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Cdh11P55288 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cdh11P55288 AC116950.1-201ENSMUST00000226322 3250 ntBASIC5.95□□□□□ -1.46
Cdh11P55288 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cdh11P55288 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cdh11P55288 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Cdh11P55288 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Cdh11P55288 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC5.95□□□□□ -1.46
Cdh11P55288 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Cdh11P55288 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
Cdh11P55288 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Cdh11P55288 Gm18248-201ENSMUST00000191164 1846 ntBASIC5.95□□□□□ -1.46
Cdh11P55288 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cdh11P55288 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cdh11P55288 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Cdh11P55288 Gm37278-201ENSMUST00000191619 2872 ntBASIC5.94□□□□□ -1.46
Cdh11P55288 Gm44584-201ENSMUST00000208395 2880 ntBASIC5.94□□□□□ -1.46
Cdh11P55288 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cdh11P55288 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cdh11P55288 AC124680.1-201ENSMUST00000223923 1585 ntBASIC5.94□□□□□ -1.46
Cdh11P55288 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Cdh11P55288 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cdh11P55288 AC125328.1-201ENSMUST00000226812 2265 ntBASIC5.94□□□□□ -1.46
Cdh11P55288 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cdh11P55288 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC5.94□□□□□ -1.46
Cdh11P55288 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC5.94□□□□□ -1.46
Cdh11P55288 Gm11501-201ENSMUST00000118039 581 ntBASIC5.94□□□□□ -1.46
Cdh11P55288 Gm12175-201ENSMUST00000122081 345 ntBASIC5.94□□□□□ -1.46
Cdh11P55288 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC5.94□□□□□ -1.46
Cdh11P55288 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC5.94□□□□□ -1.46
Cdh11P55288 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC5.94□□□□□ -1.46
Cdh11P55288 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC5.94□□□□□ -1.46
Cdh11P55288 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC5.94□□□□□ -1.46
Cdh11P55288 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC5.94□□□□□ -1.46
Cdh11P55288 Gm16102-201ENSMUST00000160955 420 ntBASIC5.94□□□□□ -1.46
Cdh11P55288 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Cdh11P55288 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Cdh11P55288 Gm3585-201ENSMUST00000173438 875 ntBASIC5.94□□□□□ -1.46
Cdh11P55288 Gm24155-201ENSMUST00000175259 110 ntBASIC5.94□□□□□ -1.46
Cdh11P55288 Gm28739-201ENSMUST00000185415 696 ntBASIC5.94□□□□□ -1.46
Cdh11P55288 Gm28219-201ENSMUST00000185452 696 ntBASIC5.94□□□□□ -1.46
Cdh11P55288 Gm28542-201ENSMUST00000185545 696 ntBASIC5.94□□□□□ -1.46
Cdh11P55288 Gm28303-201ENSMUST00000185642 747 ntBASIC5.94□□□□□ -1.46
Cdh11P55288 Gm29244-201ENSMUST00000185825 696 ntBASIC5.94□□□□□ -1.46
Cdh11P55288 Gm29437-201ENSMUST00000185865 696 ntBASIC5.94□□□□□ -1.46
Cdh11P55288 Gm29412-201ENSMUST00000185869 696 ntBASIC5.94□□□□□ -1.46
Cdh11P55288 Gm28910-201ENSMUST00000185921 696 ntBASIC5.94□□□□□ -1.46
Cdh11P55288 Gm28812-201ENSMUST00000185963 696 ntBASIC5.94□□□□□ -1.46
Cdh11P55288 Gm29468-201ENSMUST00000185978 696 ntBASIC5.94□□□□□ -1.46
Cdh11P55288 Gm28335-201ENSMUST00000186204 696 ntBASIC5.94□□□□□ -1.46
Cdh11P55288 Gm28854-201ENSMUST00000186218 696 ntBASIC5.94□□□□□ -1.46
Cdh11P55288 Gm28636-201ENSMUST00000186353 696 ntBASIC5.94□□□□□ -1.46
Cdh11P55288 Gm28452-201ENSMUST00000186623 696 ntBASIC5.94□□□□□ -1.46
Cdh11P55288 Gm29298-201ENSMUST00000186704 696 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms