Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC6.44□□□□□ -1.38
Fdft1P53798 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Fdft1P53798 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Fdft1P53798 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Fdft1P53798 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Fdft1P53798 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Fdft1P53798 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Fdft1P53798 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC6.44□□□□□ -1.38
Fdft1P53798 Gm13566-201ENSMUST00000117428 1142 ntBASIC6.44□□□□□ -1.38
Fdft1P53798 Gm15621-201ENSMUST00000119162 364 ntBASIC6.44□□□□□ -1.38
Fdft1P53798 Gm5166-201ENSMUST00000121332 573 ntBASIC6.44□□□□□ -1.38
Fdft1P53798 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC6.44□□□□□ -1.38
Fdft1P53798 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Fdft1P53798 Gm9064-201ENSMUST00000163579 566 ntBASIC6.44□□□□□ -1.38
Fdft1P53798 Mir6908-201ENSMUST00000184056 63 ntBASIC6.44□□□□□ -1.38
Fdft1P53798 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Fdft1P53798 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC6.44□□□□□ -1.38
Fdft1P53798 Gm9367-201ENSMUST00000205703 546 ntBASIC6.44□□□□□ -1.38
Fdft1P53798 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC6.44□□□□□ -1.38
Fdft1P53798 Gm45693-201ENSMUST00000211391 1157 ntBASIC6.44□□□□□ -1.38
Fdft1P53798 AC154573.2-201ENSMUST00000224174 378 ntBASIC6.44□□□□□ -1.38
Fdft1P53798 AC154806.1-203ENSMUST00000227370 1032 ntBASIC6.44□□□□□ -1.38
Fdft1P53798 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Fdft1P53798 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Fdft1P53798 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Fdft1P53798 Gm23054-201ENSMUST00000082804 162 ntBASIC6.44□□□□□ -1.38
Fdft1P53798 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Fdft1P53798 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Fdft1P53798 Gm37435-201ENSMUST00000192078 3947 ntBASIC6.44□□□□□ -1.38
Fdft1P53798 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Fdft1P53798 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Fdft1P53798 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Fdft1P53798 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC6.44□□□□□ -1.38
Fdft1P53798 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Fdft1P53798 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Fdft1P53798 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Fdft1P53798 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC6.44□□□□□ -1.38
Fdft1P53798 Gm42727-201ENSMUST00000202446 2823 ntBASIC6.44□□□□□ -1.38
Fdft1P53798 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Fdft1P53798 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Fdft1P53798 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
Fdft1P53798 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Fdft1P53798 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC6.43□□□□□ -1.38
Fdft1P53798 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Fdft1P53798 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Fdft1P53798 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC6.43□□□□□ -1.38
Fdft1P53798 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC6.43□□□□□ -1.38
Fdft1P53798 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC6.43□□□□□ -1.38
Fdft1P53798 Gm42881-201ENSMUST00000198636 3344 ntBASIC6.43□□□□□ -1.38
Fdft1P53798 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Fdft1P53798 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Fdft1P53798 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Fdft1P53798 Gm14614-201ENSMUST00000119873 384 ntBASIC6.43□□□□□ -1.38
Fdft1P53798 Gm12778-201ENSMUST00000122341 333 ntBASIC6.43□□□□□ -1.38
Fdft1P53798 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Fdft1P53798 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC6.43□□□□□ -1.38
Fdft1P53798 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Fdft1P53798 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC6.43□□□□□ -1.38
Fdft1P53798 Gm11545-201ENSMUST00000146507 375 ntBASIC6.43□□□□□ -1.38
Fdft1P53798 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC6.43□□□□□ -1.38
Fdft1P53798 Gm23071-201ENSMUST00000158242 115 ntBASIC6.43□□□□□ -1.38
Fdft1P53798 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Fdft1P53798 Gm8609-201ENSMUST00000182967 998 ntBASIC6.43□□□□□ -1.38
Fdft1P53798 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC6.43□□□□□ -1.38
Fdft1P53798 Mir6987-201ENSMUST00000184789 73 ntBASIC6.43□□□□□ -1.38
Fdft1P53798 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Fdft1P53798 Gm20926-201ENSMUST00000194457 696 ntBASIC6.43□□□□□ -1.38
Fdft1P53798 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC6.43□□□□□ -1.38
Fdft1P53798 Gm18838-201ENSMUST00000204855 886 ntBASIC6.43□□□□□ -1.38
Fdft1P53798 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Fdft1P53798 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Fdft1P53798 AL929555.1-201ENSMUST00000215283 509 ntBASIC6.43□□□□□ -1.38
Fdft1P53798 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Fdft1P53798 Gm7441-201ENSMUST00000220697 1074 ntBASIC6.43□□□□□ -1.38
Fdft1P53798 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC6.43□□□□□ -1.38
Fdft1P53798 Gm6575-201ENSMUST00000222946 697 ntBASIC6.43□□□□□ -1.38
Fdft1P53798 AC132260.1-201ENSMUST00000225499 734 ntBASIC6.43□□□□□ -1.38
Fdft1P53798 AC116591.1-201ENSMUST00000227919 351 ntBASIC6.43□□□□□ -1.38
Fdft1P53798 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Fdft1P53798 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Fdft1P53798 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Fdft1P53798 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Fdft1P53798 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Fdft1P53798 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Fdft1P53798 Gm37076-201ENSMUST00000192033 2294 ntBASIC6.43□□□□□ -1.38
Fdft1P53798 Gm38156-201ENSMUST00000194601 2260 ntBASIC6.43□□□□□ -1.38
Fdft1P53798 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Fdft1P53798 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC6.43□□□□□ -1.38
Fdft1P53798 Gm2080-201ENSMUST00000211299 1573 ntBASIC6.43□□□□□ -1.38
Fdft1P53798 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Fdft1P53798 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.43□□□□□ -1.38
Fdft1P53798 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Fdft1P53798 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Fdft1P53798 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Fdft1P53798 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC6.43□□□□□ -1.38
Fdft1P53798 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC6.42□□□□□ -1.38
Fdft1P53798 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Fdft1P53798 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Fdft1P53798 Gm38257-201ENSMUST00000195881 2761 ntBASIC6.42□□□□□ -1.38
Fdft1P53798 Gm45424-201ENSMUST00000210575 3300 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms