Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sox3P53784 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sox3P53784 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC6.31□□□□□ -1.4
Sox3P53784 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sox3P53784 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Sox3P53784 Gm38276-201ENSMUST00000192446 1343 ntBASIC6.31□□□□□ -1.4
Sox3P53784 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC6.31□□□□□ -1.4
Sox3P53784 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sox3P53784 AC116476.1-201ENSMUST00000226274 2318 ntBASIC6.31□□□□□ -1.4
Sox3P53784 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Sox3P53784 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Sox3P53784 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sox3P53784 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sox3P53784 Gm37525-201ENSMUST00000193499 2871 ntBASIC6.31□□□□□ -1.4
Sox3P53784 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC6.31□□□□□ -1.4
Sox3P53784 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC6.31□□□□□ -1.4
Sox3P53784 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC6.31□□□□□ -1.4
Sox3P53784 Gm14466-201ENSMUST00000119028 451 ntBASIC6.31□□□□□ -1.4
Sox3P53784 Gm14212-201ENSMUST00000122023 826 ntBASIC6.31□□□□□ -1.4
Sox3P53784 Gm15300-201ENSMUST00000122324 279 ntBASIC6.31□□□□□ -1.4
Sox3P53784 Gm20614-201ENSMUST00000177106 632 ntBASIC6.31□□□□□ -1.4
Sox3P53784 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC6.31□□□□□ -1.4
Sox3P53784 Gm7426-201ENSMUST00000179046 404 ntBASIC6.31□□□□□ -1.4
Sox3P53784 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Sox3P53784 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Sox3P53784 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sox3P53784 Gm28918-201ENSMUST00000188822 699 ntBASIC6.31□□□□□ -1.4
Sox3P53784 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC6.31□□□□□ -1.4
Sox3P53784 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC6.31□□□□□ -1.4
Sox3P53784 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC6.31□□□□□ -1.4
Sox3P53784 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Sox3P53784 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC6.31□□□□□ -1.4
Sox3P53784 Gm42753-201ENSMUST00000196718 1268 ntBASIC6.31□□□□□ -1.4
Sox3P53784 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC6.31□□□□□ -1.4
Sox3P53784 Gm36758-201ENSMUST00000222594 310 ntBASIC6.31□□□□□ -1.4
Sox3P53784 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC6.31□□□□□ -1.4
Sox3P53784 AC154324.1-201ENSMUST00000226711 814 ntBASIC6.31□□□□□ -1.4
Sox3P53784 CT009600.1-201ENSMUST00000228771 337 ntBASIC6.31□□□□□ -1.4
Sox3P53784 Gm26163-201ENSMUST00000083792 178 ntBASIC6.31□□□□□ -1.4
Sox3P53784 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sox3P53784 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Sox3P53784 Gm14245-201ENSMUST00000118939 1843 ntBASIC6.31□□□□□ -1.4
Sox3P53784 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC6.31□□□□□ -1.4
Sox3P53784 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sox3P53784 Gm43128-201ENSMUST00000202212 1621 ntBASIC6.31□□□□□ -1.4
Sox3P53784 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Sox3P53784 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sox3P53784 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Sox3P53784 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Sox3P53784 Gm11242-201ENSMUST00000120103 2457 ntBASIC6.31□□□□□ -1.4
Sox3P53784 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Sox3P53784 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sox3P53784 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sox3P53784 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sox3P53784 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
Sox3P53784 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sox3P53784 Gm44797-201ENSMUST00000208780 1837 ntBASIC6.3□□□□□ -1.4
Sox3P53784 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sox3P53784 Gm37967-201ENSMUST00000195634 2665 ntBASIC6.3□□□□□ -1.4
Sox3P53784 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
Sox3P53784 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Sox3P53784 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sox3P53784 Gm8424-201ENSMUST00000117716 988 ntBASIC6.3□□□□□ -1.4
Sox3P53784 Gm6977-201ENSMUST00000121568 512 ntBASIC6.3□□□□□ -1.4
Sox3P53784 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC6.3□□□□□ -1.4
Sox3P53784 Gm24065-201ENSMUST00000157487 264 ntBASIC6.3□□□□□ -1.4
Sox3P53784 Gm24286-201ENSMUST00000157632 128 ntBASIC6.3□□□□□ -1.4
Sox3P53784 Gm24228-201ENSMUST00000158829 129 ntBASIC6.3□□□□□ -1.4
Sox3P53784 Gm3140-201ENSMUST00000163523 481 ntBASIC6.3□□□□□ -1.4
Sox3P53784 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Sox3P53784 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Sox3P53784 Mir3097-201ENSMUST00000175356 67 ntBASIC6.3□□□□□ -1.4
Sox3P53784 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Sox3P53784 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC6.3□□□□□ -1.4
Sox3P53784 Gm18352-201ENSMUST00000189113 902 ntBASIC6.3□□□□□ -1.4
Sox3P53784 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC6.3□□□□□ -1.4
Sox3P53784 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
Sox3P53784 Gm45693-201ENSMUST00000211391 1157 ntBASIC6.3□□□□□ -1.4
Sox3P53784 Gm34424-201ENSMUST00000213400 782 ntBASIC6.3□□□□□ -1.4
Sox3P53784 Mylf-ps-201ENSMUST00000222174 421 ntBASIC6.3□□□□□ -1.4
Sox3P53784 AC163660.1-201ENSMUST00000223696 818 ntBASIC6.3□□□□□ -1.4
Sox3P53784 AL669819.1-201ENSMUST00000225143 330 ntBASIC6.3□□□□□ -1.4
Sox3P53784 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sox3P53784 Gm26442-201ENSMUST00000082588 153 ntBASIC6.3□□□□□ -1.4
Sox3P53784 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sox3P53784 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sox3P53784 Gm37142-201ENSMUST00000193718 3110 ntBASIC6.3□□□□□ -1.4
Sox3P53784 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sox3P53784 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sox3P53784 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Sox3P53784 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Sox3P53784 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sox3P53784 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sox3P53784 AC107763.1-202ENSMUST00000225021 2663 ntBASIC6.3□□□□□ -1.4
Sox3P53784 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
Sox3P53784 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC6.3□□□□□ -1.4
Sox3P53784 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Sox3P53784 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Sox3P53784 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
Sox3P53784 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms