Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Lhx3P50481 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Lhx3P50481 Gm44417-201ENSMUST00000203298 3359 ntBASIC6.61□□□□□ -1.35
Lhx3P50481 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Lhx3P50481 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC6.61□□□□□ -1.35
Lhx3P50481 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Lhx3P50481 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Lhx3P50481 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Lhx3P50481 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Lhx3P50481 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Lhx3P50481 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Lhx3P50481 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Lhx3P50481 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC6.61□□□□□ -1.35
Lhx3P50481 Gm38070-201ENSMUST00000191850 6480 ntBASIC6.61□□□□□ -1.35
Lhx3P50481 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Lhx3P50481 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
Lhx3P50481 AC129085.2-201ENSMUST00000223763 2800 ntBASIC6.61□□□□□ -1.35
Lhx3P50481 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Lhx3P50481 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Lhx3P50481 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Lhx3P50481 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Lhx3P50481 Gm38368-201ENSMUST00000193181 1335 ntBASIC6.61□□□□□ -1.35
Lhx3P50481 Gm9519-201ENSMUST00000206108 1337 ntBASIC6.61□□□□□ -1.35
Lhx3P50481 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Lhx3P50481 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Lhx3P50481 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Lhx3P50481 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Lhx3P50481 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Lhx3P50481 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC6.61□□□□□ -1.35
Lhx3P50481 Olfr538-202ENSMUST00000210973 1920 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Lhx3P50481 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
Lhx3P50481 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC6.61□□□□□ -1.35
Lhx3P50481 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC6.61□□□□□ -1.35
Lhx3P50481 Gm12369-201ENSMUST00000121343 942 ntBASIC6.61□□□□□ -1.35
Lhx3P50481 Sms-ps-201ENSMUST00000121773 1101 ntBASIC6.61□□□□□ -1.35
Lhx3P50481 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Lhx3P50481 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC6.61□□□□□ -1.35
Lhx3P50481 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC6.61□□□□□ -1.35
Lhx3P50481 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Lhx3P50481 Gm22094-201ENSMUST00000158976 117 ntBASIC6.61□□□□□ -1.35
Lhx3P50481 Gm8282-201ENSMUST00000187559 483 ntBASIC6.61□□□□□ -1.35
Lhx3P50481 Gm28455-201ENSMUST00000189105 1290 ntBASIC6.61□□□□□ -1.35
Lhx3P50481 Gm29036-201ENSMUST00000189967 877 ntBASIC6.61□□□□□ -1.35
Lhx3P50481 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
Lhx3P50481 AC099760.1-201ENSMUST00000196300 153 ntBASIC6.61□□□□□ -1.35
Lhx3P50481 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Lhx3P50481 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC6.61□□□□□ -1.35
Lhx3P50481 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC6.61□□□□□ -1.35
Lhx3P50481 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC6.61□□□□□ -1.35
Lhx3P50481 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Lhx3P50481 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC6.61□□□□□ -1.35
Lhx3P50481 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Lhx3P50481 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Lhx3P50481 AC121804.1-201ENSMUST00000221016 394 ntBASIC6.61□□□□□ -1.35
Lhx3P50481 Gm18955-201ENSMUST00000223173 649 ntBASIC6.61□□□□□ -1.35
Lhx3P50481 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
Lhx3P50481 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Lhx3P50481 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Lhx3P50481 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Lhx3P50481 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Lhx3P50481 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Lhx3P50481 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Lhx3P50481 Gm28379-202ENSMUST00000187676 2896 ntBASIC6.6□□□□□ -1.35
Lhx3P50481 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Lhx3P50481 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
Lhx3P50481 Thap6-201ENSMUST00000191860 3151 ntBASIC6.6□□□□□ -1.35
Lhx3P50481 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC6.6□□□□□ -1.35
Lhx3P50481 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC6.6□□□□□ -1.35
Lhx3P50481 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Lhx3P50481 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC6.6□□□□□ -1.35
Lhx3P50481 Gm4927-201ENSMUST00000219548 1318 ntBASIC6.6□□□□□ -1.35
Lhx3P50481 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Lhx3P50481 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Lhx3P50481 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC6.6□□□□□ -1.35
Lhx3P50481 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Lhx3P50481 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Lhx3P50481 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
Lhx3P50481 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Lhx3P50481 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Lhx3P50481 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Lhx3P50481 Gm7212-201ENSMUST00000120817 348 ntBASIC6.6□□□□□ -1.35
Lhx3P50481 Gm6027-201ENSMUST00000121467 756 ntBASIC6.6□□□□□ -1.35
Lhx3P50481 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC6.6□□□□□ -1.35
Lhx3P50481 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Lhx3P50481 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC6.6□□□□□ -1.35
Lhx3P50481 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC6.6□□□□□ -1.35
Lhx3P50481 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC6.6□□□□□ -1.35
Lhx3P50481 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Lhx3P50481 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Lhx3P50481 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC6.6□□□□□ -1.35
Lhx3P50481 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC6.6□□□□□ -1.35
Lhx3P50481 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC6.6□□□□□ -1.35
Lhx3P50481 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC6.6□□□□□ -1.35
Lhx3P50481 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC6.6□□□□□ -1.35
Lhx3P50481 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC6.6□□□□□ -1.35
Lhx3P50481 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC6.6□□□□□ -1.35
Lhx3P50481 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC6.6□□□□□ -1.35
Lhx3P50481 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC6.6□□□□□ -1.35
Lhx3P50481 Gm8454-201ENSMUST00000196980 811 ntBASIC6.6□□□□□ -1.35
Lhx3P50481 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC6.6□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 98.5 ms