Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm6726-201ENSMUST00000172786 681 ntBASIC7.09□□□□□ -1.27
Shmt1P50431 Gm22132-201ENSMUST00000175316 100 ntBASIC7.09□□□□□ -1.27
Shmt1P50431 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Shmt1P50431 Gm21614-201ENSMUST00000183260 1005 ntBASIC7.09□□□□□ -1.27
Shmt1P50431 Mir6348-201ENSMUST00000183804 120 ntBASIC7.09□□□□□ -1.27
Shmt1P50431 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC7.09□□□□□ -1.27
Shmt1P50431 Gm37599-201ENSMUST00000193067 489 ntBASIC7.09□□□□□ -1.27
Shmt1P50431 Gm6077-201ENSMUST00000196008 499 ntBASIC7.09□□□□□ -1.27
Shmt1P50431 Igkv4-83-201ENSMUST00000196933 334 ntBASIC7.09□□□□□ -1.27
Shmt1P50431 Gm44694-201ENSMUST00000205317 1298 ntBASIC7.09□□□□□ -1.27
Shmt1P50431 Gm4290-201ENSMUST00000206897 814 ntBASIC7.09□□□□□ -1.27
Shmt1P50431 Gm44690-201ENSMUST00000207984 382 ntBASIC7.09□□□□□ -1.27
Shmt1P50431 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC7.09□□□□□ -1.27
Shmt1P50431 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC7.09□□□□□ -1.27
Shmt1P50431 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Shmt1P50431 Olfr923-204ENSMUST00000219798 1068 ntBASIC7.09□□□□□ -1.27
Shmt1P50431 AC164629.1-201ENSMUST00000220250 1113 ntBASIC7.09□□□□□ -1.27
Shmt1P50431 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC7.09□□□□□ -1.27
Shmt1P50431 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC7.09□□□□□ -1.27
Shmt1P50431 AC156016.2-201ENSMUST00000228200 525 ntBASIC7.09□□□□□ -1.27
Shmt1P50431 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Shmt1P50431 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Shmt1P50431 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Shmt1P50431 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Shmt1P50431 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Shmt1P50431 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Shmt1P50431 Olfr115-203ENSMUST00000223366 2273 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Shmt1P50431 Gm10855-201ENSMUST00000100426 2541 ntBASIC7.09□□□□□ -1.27
Shmt1P50431 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Shmt1P50431 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Shmt1P50431 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Shmt1P50431 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.28
Shmt1P50431 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
Shmt1P50431 Gm37530-201ENSMUST00000191759 4932 ntBASIC7.09□□□□□ -1.28
Shmt1P50431 AC153729.1-201ENSMUST00000214055 2562 ntBASIC7.09□□□□□ -1.28
Shmt1P50431 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
Shmt1P50431 Gm42763-201ENSMUST00000199595 2087 ntBASIC7.08□□□□□ -1.28
Shmt1P50431 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Shmt1P50431 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Shmt1P50431 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Shmt1P50431 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC7.08□□□□□ -1.28
Shmt1P50431 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Shmt1P50431 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Shmt1P50431 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC7.08□□□□□ -1.28
Shmt1P50431 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Shmt1P50431 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC7.08□□□□□ -1.28
Shmt1P50431 Gm13265-201ENSMUST00000118090 421 ntBASIC7.08□□□□□ -1.28
Shmt1P50431 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC7.08□□□□□ -1.28
Shmt1P50431 Gm6382-201ENSMUST00000118873 942 ntBASIC7.08□□□□□ -1.28
Shmt1P50431 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC7.08□□□□□ -1.28
Shmt1P50431 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Shmt1P50431 Gm12451-201ENSMUST00000121636 633 ntBASIC7.08□□□□□ -1.28
Shmt1P50431 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Shmt1P50431 Gm14747-201ENSMUST00000149888 984 ntBASIC7.08□□□□□ -1.28
Shmt1P50431 Mir1953-201ENSMUST00000157866 89 ntBASIC7.08□□□□□ -1.28
Shmt1P50431 Gm25660-201ENSMUST00000158470 104 ntBASIC7.08□□□□□ -1.28
Shmt1P50431 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Shmt1P50431 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
Shmt1P50431 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Shmt1P50431 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Shmt1P50431 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Shmt1P50431 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Shmt1P50431 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Shmt1P50431 Gm27152-201ENSMUST00000183828 99 ntBASIC7.08□□□□□ -1.28
Shmt1P50431 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
Shmt1P50431 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC7.08□□□□□ -1.28
Shmt1P50431 Gm18547-201ENSMUST00000192439 811 ntBASIC7.08□□□□□ -1.28
Shmt1P50431 Gm37493-201ENSMUST00000193167 433 ntBASIC7.08□□□□□ -1.28
Shmt1P50431 Gm43383-201ENSMUST00000195981 469 ntBASIC7.08□□□□□ -1.28
Shmt1P50431 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Shmt1P50431 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC7.08□□□□□ -1.28
Shmt1P50431 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC7.08□□□□□ -1.28
Shmt1P50431 Gm18943-201ENSMUST00000207357 1216 ntBASIC7.08□□□□□ -1.28
Shmt1P50431 Gm6290-201ENSMUST00000207666 1158 ntBASIC7.08□□□□□ -1.28
Shmt1P50431 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Shmt1P50431 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC7.08□□□□□ -1.28
Shmt1P50431 Gm7769-201ENSMUST00000212900 933 ntBASIC7.08□□□□□ -1.28
Shmt1P50431 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Shmt1P50431 Gm8607-201ENSMUST00000221864 431 ntBASIC7.08□□□□□ -1.28
Shmt1P50431 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC7.08□□□□□ -1.28
Shmt1P50431 A1cf-203ENSMUST00000224400 1204 ntBASIC7.08□□□□□ -1.28
Shmt1P50431 AC122533.1-201ENSMUST00000225177 767 ntBASIC7.08□□□□□ -1.28
Shmt1P50431 AC123665.3-201ENSMUST00000228735 1216 ntBASIC7.08□□□□□ -1.28
Shmt1P50431 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Shmt1P50431 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Shmt1P50431 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Shmt1P50431 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Shmt1P50431 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Shmt1P50431 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Shmt1P50431 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Shmt1P50431 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Shmt1P50431 Gm37902-201ENSMUST00000192839 1683 ntBASIC7.08□□□□□ -1.28
Shmt1P50431 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Shmt1P50431 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Shmt1P50431 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Shmt1P50431 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Shmt1P50431 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Shmt1P50431 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Shmt1P50431 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Shmt1P50431 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms