Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 AC125487.2-201ENSMUST00000219810 1300 ntBASIC6.25□□□□□ -1.41
Cdx2P43241 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx2P43241 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC6.25□□□□□ -1.41
Cdx2P43241 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx2P43241 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Cdx2P43241 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Cdx2P43241 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Cdx2P43241 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx2P43241 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Cdx2P43241 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC6.25□□□□□ -1.41
Cdx2P43241 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Cdx2P43241 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
Cdx2P43241 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx2P43241 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx2P43241 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC6.25□□□□□ -1.41
Cdx2P43241 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC6.25□□□□□ -1.41
Cdx2P43241 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC6.25□□□□□ -1.41
Cdx2P43241 Gm15257-201ENSMUST00000177680 883 ntBASIC6.25□□□□□ -1.41
Cdx2P43241 Gm15252-201ENSMUST00000177750 883 ntBASIC6.25□□□□□ -1.41
Cdx2P43241 Gm15256-201ENSMUST00000177793 883 ntBASIC6.25□□□□□ -1.41
Cdx2P43241 Gm15260-201ENSMUST00000179402 883 ntBASIC6.25□□□□□ -1.41
Cdx2P43241 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC6.25□□□□□ -1.41
Cdx2P43241 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx2P43241 Gm3544-201ENSMUST00000196129 305 ntBASIC6.25□□□□□ -1.41
Cdx2P43241 Gm17918-201ENSMUST00000205315 574 ntBASIC6.25□□□□□ -1.41
Cdx2P43241 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC6.25□□□□□ -1.41
Cdx2P43241 Gm19195-201ENSMUST00000222018 511 ntBASIC6.25□□□□□ -1.41
Cdx2P43241 AC113125.2-201ENSMUST00000226837 362 ntBASIC6.25□□□□□ -1.41
Cdx2P43241 AC159979.1-201ENSMUST00000227927 342 ntBASIC6.25□□□□□ -1.41
Cdx2P43241 AC154563.1-201ENSMUST00000228317 442 ntBASIC6.25□□□□□ -1.41
Cdx2P43241 AC125117.2-201ENSMUST00000228344 1140 ntBASIC6.25□□□□□ -1.41
Cdx2P43241 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Cdx2P43241 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
Cdx2P43241 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC6.25□□□□□ -1.41
Cdx2P43241 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC6.25□□□□□ -1.41
Cdx2P43241 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx2P43241 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Cdx2P43241 Gm37945-201ENSMUST00000192536 4367 ntBASIC6.25□□□□□ -1.41
Cdx2P43241 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Cdx2P43241 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx2P43241 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx2P43241 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx2P43241 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx2P43241 AC139758.3-201ENSMUST00000226853 2704 ntBASIC6.25□□□□□ -1.41
Cdx2P43241 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Cdx2P43241 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Cdx2P43241 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx2P43241 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx2P43241 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx2P43241 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx2P43241 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx2P43241 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx2P43241 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Cdx2P43241 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx2P43241 Gm37364-201ENSMUST00000192533 3920 ntBASIC6.24□□□□□ -1.41
Cdx2P43241 AC161884.1-201ENSMUST00000225436 2174 ntBASIC6.24□□□□□ -1.41
Cdx2P43241 Gm6101-201ENSMUST00000195384 1867 ntBASIC6.24□□□□□ -1.41
Cdx2P43241 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx2P43241 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx2P43241 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx2P43241 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC6.24□□□□□ -1.41
Cdx2P43241 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx2P43241 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC6.24□□□□□ -1.41
Cdx2P43241 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx2P43241 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx2P43241 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC6.24□□□□□ -1.41
Cdx2P43241 Gm26037-201ENSMUST00000158150 311 ntBASIC6.24□□□□□ -1.41
Cdx2P43241 Gm25487-201ENSMUST00000158725 125 ntBASIC6.24□□□□□ -1.41
Cdx2P43241 Gm7952-201ENSMUST00000180540 984 ntBASIC6.24□□□□□ -1.41
Cdx2P43241 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx2P43241 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC6.24□□□□□ -1.41
Cdx2P43241 Mir3473e-201ENSMUST00000183932 110 ntBASIC6.24□□□□□ -1.41
Cdx2P43241 Gm27853-201ENSMUST00000184176 250 ntBASIC6.24□□□□□ -1.41
Cdx2P43241 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC6.24□□□□□ -1.41
Cdx2P43241 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC6.24□□□□□ -1.41
Cdx2P43241 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC6.24□□□□□ -1.41
Cdx2P43241 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC6.24□□□□□ -1.41
Cdx2P43241 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC6.24□□□□□ -1.41
Cdx2P43241 Gm9517-201ENSMUST00000195021 874 ntBASIC6.24□□□□□ -1.41
Cdx2P43241 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Cdx2P43241 Gm43382-201ENSMUST00000198954 838 ntBASIC6.24□□□□□ -1.41
Cdx2P43241 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC6.24□□□□□ -1.41
Cdx2P43241 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC6.24□□□□□ -1.41
Cdx2P43241 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC6.24□□□□□ -1.41
Cdx2P43241 AC170086.2-201ENSMUST00000224733 803 ntBASIC6.24□□□□□ -1.41
Cdx2P43241 AC116591.1-201ENSMUST00000227919 351 ntBASIC6.24□□□□□ -1.41
Cdx2P43241 AC168062.1-201ENSMUST00000228048 769 ntBASIC6.24□□□□□ -1.41
Cdx2P43241 Gm8256-203ENSMUST00000228692 591 ntBASIC6.24□□□□□ -1.41
Cdx2P43241 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx2P43241 Gm2531-201ENSMUST00000075609 512 ntBASIC6.24□□□□□ -1.41
Cdx2P43241 Gm15732-201ENSMUST00000079794 480 ntBASIC6.24□□□□□ -1.41
Cdx2P43241 Olfr467-201ENSMUST00000084756 927 ntBASIC6.24□□□□□ -1.41
Cdx2P43241 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx2P43241 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Cdx2P43241 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC6.24□□□□□ -1.41
Cdx2P43241 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx2P43241 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx2P43241 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx2P43241 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdx2P43241 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms