Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sox6P40645 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sox6P40645 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Sox6P40645 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sox6P40645 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sox6P40645 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sox6P40645 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Sox6P40645 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Sox6P40645 Gm26146-201ENSMUST00000104478 185 ntBASIC6.09□□□□□ -1.43
Sox6P40645 Gm25344-201ENSMUST00000104503 132 ntBASIC6.09□□□□□ -1.43
Sox6P40645 Gm12174-201ENSMUST00000119853 813 ntBASIC6.09□□□□□ -1.43
Sox6P40645 Gm11962-201ENSMUST00000145746 255 ntBASIC6.09□□□□□ -1.43
Sox6P40645 Gm25722-201ENSMUST00000157498 279 ntBASIC6.09□□□□□ -1.43
Sox6P40645 Gm26321-201ENSMUST00000157740 242 ntBASIC6.09□□□□□ -1.43
Sox6P40645 Gm23762-201ENSMUST00000158348 106 ntBASIC6.09□□□□□ -1.43
Sox6P40645 Gm24545-201ENSMUST00000158651 85 ntBASIC6.09□□□□□ -1.43
Sox6P40645 Gm15734-201ENSMUST00000163076 1040 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sox6P40645 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sox6P40645 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC6.09□□□□□ -1.43
Sox6P40645 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Sox6P40645 Gm43546-201ENSMUST00000196721 943 ntBASIC6.09□□□□□ -1.43
Sox6P40645 Gm5711-201ENSMUST00000197896 421 ntBASIC6.09□□□□□ -1.43
Sox6P40645 Gm42581-201ENSMUST00000201774 966 ntBASIC6.09□□□□□ -1.43
Sox6P40645 Gm42713-201ENSMUST00000202709 945 ntBASIC6.09□□□□□ -1.43
Sox6P40645 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
Sox6P40645 Gm45136-201ENSMUST00000205793 943 ntBASIC6.09□□□□□ -1.43
Sox6P40645 Gm5027-201ENSMUST00000206700 375 ntBASIC6.09□□□□□ -1.43
Sox6P40645 Gm18781-201ENSMUST00000211252 924 ntBASIC6.09□□□□□ -1.43
Sox6P40645 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sox6P40645 Olfr809-203ENSMUST00000218237 1100 ntBASIC6.09□□□□□ -1.43
Sox6P40645 Olfr923-204ENSMUST00000219798 1068 ntBASIC6.09□□□□□ -1.43
Sox6P40645 AC155270.1-202ENSMUST00000221503 352 ntBASIC6.09□□□□□ -1.43
Sox6P40645 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC6.09□□□□□ -1.43
Sox6P40645 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC6.09□□□□□ -1.43
Sox6P40645 AC154461.5-201ENSMUST00000225429 774 ntBASIC6.09□□□□□ -1.43
Sox6P40645 CT025667.1-201ENSMUST00000225872 382 ntBASIC6.09□□□□□ -1.43
Sox6P40645 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Sox6P40645 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Sox6P40645 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Sox6P40645 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sox6P40645 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sox6P40645 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sox6P40645 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sox6P40645 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sox6P40645 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sox6P40645 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sox6P40645 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Sox6P40645 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Sox6P40645 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
Sox6P40645 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
Sox6P40645 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC6.09□□□□□ -1.44
Sox6P40645 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Sox6P40645 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Sox6P40645 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Sox6P40645 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sox6P40645 Wnk1-218ENSMUST00000161512 1426 ntBASIC6.08□□□□□ -1.44
Sox6P40645 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Sox6P40645 Gm14895-201ENSMUST00000121858 1361 ntBASIC6.08□□□□□ -1.44
Sox6P40645 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sox6P40645 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Sox6P40645 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sox6P40645 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sox6P40645 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sox6P40645 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Sox6P40645 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sox6P40645 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Sox6P40645 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sox6P40645 Gm13739-201ENSMUST00000118020 530 ntBASIC6.08□□□□□ -1.44
Sox6P40645 Gm6987-201ENSMUST00000119319 428 ntBASIC6.08□□□□□ -1.44
Sox6P40645 Gm15842-201ENSMUST00000120513 618 ntBASIC6.08□□□□□ -1.44
Sox6P40645 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC6.08□□□□□ -1.44
Sox6P40645 Gm25717-201ENSMUST00000158631 353 ntBASIC6.08□□□□□ -1.44
Sox6P40645 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sox6P40645 Gm25574-201ENSMUST00000175245 249 ntBASIC6.08□□□□□ -1.44
Sox6P40645 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sox6P40645 Gm5345-201ENSMUST00000183076 1014 ntBASIC6.08□□□□□ -1.44
Sox6P40645 Mir6908-201ENSMUST00000184056 63 ntBASIC6.08□□□□□ -1.44
Sox6P40645 Gm27507-201ENSMUST00000184199 93 ntBASIC6.08□□□□□ -1.44
Sox6P40645 Gm27185-201ENSMUST00000184296 247 ntBASIC6.08□□□□□ -1.44
Sox6P40645 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sox6P40645 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sox6P40645 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sox6P40645 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC6.08□□□□□ -1.44
Sox6P40645 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC6.08□□□□□ -1.44
Sox6P40645 Gm22711-202ENSMUST00000197029 135 ntBASIC6.08□□□□□ -1.44
Sox6P40645 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC6.08□□□□□ -1.44
Sox6P40645 Gm44705-201ENSMUST00000206719 339 ntBASIC6.08□□□□□ -1.44
Sox6P40645 Gm45196-201ENSMUST00000206751 825 ntBASIC6.08□□□□□ -1.44
Sox6P40645 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC6.08□□□□□ -1.44
Sox6P40645 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sox6P40645 Gm46203-201ENSMUST00000218130 478 ntBASIC6.08□□□□□ -1.44
Sox6P40645 Gm19116-201ENSMUST00000218592 642 ntBASIC6.08□□□□□ -1.44
Sox6P40645 AC125064.1-201ENSMUST00000225801 295 ntBASIC6.08□□□□□ -1.44
Sox6P40645 AC159267.1-201ENSMUST00000226702 678 ntBASIC6.08□□□□□ -1.44
Sox6P40645 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Sox6P40645 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sox6P40645 Olfr716-201ENSMUST00000098137 1104 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Sox6P40645 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Sox6P40645 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sox6P40645 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms