Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm37758-201ENSMUST00000194275 629 ntBASIC8.62□□□□□ -1.03
Col18a1P39061 Gm43148-201ENSMUST00000198237 520 ntBASIC8.62□□□□□ -1.03
Col18a1P39061 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
Col18a1P39061 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC8.62□□□□□ -1.03
Col18a1P39061 AC115793.1-201ENSMUST00000216605 215 ntBASIC8.62□□□□□ -1.03
Col18a1P39061 Gm6049-201ENSMUST00000222369 458 ntBASIC8.62□□□□□ -1.03
Col18a1P39061 Vmn1r89-206ENSMUST00000227319 985 ntBASIC8.62□□□□□ -1.03
Col18a1P39061 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Col18a1P39061 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Col18a1P39061 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Col18a1P39061 Mir188-201ENSMUST00000083464 68 ntBASIC8.62□□□□□ -1.03
Col18a1P39061 Dysf-203ENSMUST00000113818 6571 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Col18a1P39061 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC8.62□□□□□ -1.03
Col18a1P39061 Gm10687-201ENSMUST00000180670 3233 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Col18a1P39061 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Col18a1P39061 Gm20541-201ENSMUST00000173035 1406 ntBASIC8.62□□□□□ -1.03
Col18a1P39061 Aagab-201ENSMUST00000041551 5294 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Col18a1P39061 Iars-206ENSMUST00000165316 4426 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Col18a1P39061 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Col18a1P39061 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Col18a1P39061 Adgrl2-214ENSMUST00000199238 4670 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Col18a1P39061 Dzank1-201ENSMUST00000081982 6847 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Col18a1P39061 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Col18a1P39061 Cacna1c-222ENSMUST00000190285 6585 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Col18a1P39061 Topaz1-201ENSMUST00000178679 5030 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Col18a1P39061 Eya3-213ENSMUST00000180250 5020 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Col18a1P39061 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Col18a1P39061 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC8.61□□□□□ -1.03
Col18a1P39061 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Col18a1P39061 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC8.61□□□□□ -1.03
Col18a1P39061 Hdac4-202ENSMUST00000097644 8100 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Col18a1P39061 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC8.61□□□□□ -1.03
Col18a1P39061 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Col18a1P39061 Mcc-201ENSMUST00000089874 7858 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Col18a1P39061 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Col18a1P39061 Mir1188-201ENSMUST00000116756 120 ntBASIC8.61□□□□□ -1.03
Col18a1P39061 Gm13222-201ENSMUST00000119638 138 ntBASIC8.61□□□□□ -1.03
Col18a1P39061 Gm15237-201ENSMUST00000122104 469 ntBASIC8.61□□□□□ -1.03
Col18a1P39061 Gm22119-201ENSMUST00000175594 99 ntBASIC8.61□□□□□ -1.03
Col18a1P39061 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Col18a1P39061 Gm16531-201ENSMUST00000180658 967 ntBASIC8.61□□□□□ -1.03
Col18a1P39061 Gm37337-201ENSMUST00000192601 993 ntBASIC8.61□□□□□ -1.03
Col18a1P39061 Gm38283-201ENSMUST00000193041 695 ntBASIC8.61□□□□□ -1.03
Col18a1P39061 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC8.61□□□□□ -1.03
Col18a1P39061 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Col18a1P39061 Gm18996-201ENSMUST00000214851 755 ntBASIC8.61□□□□□ -1.03
Col18a1P39061 AC126043.1-201ENSMUST00000221304 1141 ntBASIC8.61□□□□□ -1.03
Col18a1P39061 AC154417.1-201ENSMUST00000223876 476 ntBASIC8.61□□□□□ -1.03
Col18a1P39061 AC165260.4-201ENSMUST00000225924 724 ntBASIC8.61□□□□□ -1.03
Col18a1P39061 Tmed5-201ENSMUST00000002837 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Col18a1P39061 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Col18a1P39061 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Col18a1P39061 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Col18a1P39061 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Col18a1P39061 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Col18a1P39061 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC8.61□□□□□ -1.03
Col18a1P39061 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Col18a1P39061 Impa1-201ENSMUST00000065938 4185 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Col18a1P39061 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Col18a1P39061 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Col18a1P39061 Bmx-202ENSMUST00000112265 3005 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Col18a1P39061 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Col18a1P39061 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Col18a1P39061 Naa25-201ENSMUST00000042163 5447 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Col18a1P39061 Cdh3-201ENSMUST00000080797 4384 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Col18a1P39061 Tns1-201ENSMUST00000169786 9966 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Col18a1P39061 Gm12482-201ENSMUST00000120435 630 ntBASIC8.61□□□□□ -1.03
Col18a1P39061 Gm26489-201ENSMUST00000157880 264 ntBASIC8.61□□□□□ -1.03
Col18a1P39061 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Col18a1P39061 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Col18a1P39061 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Col18a1P39061 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Col18a1P39061 Gm18717-201ENSMUST00000192744 1241 ntBASIC8.61□□□□□ -1.03
Col18a1P39061 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Col18a1P39061 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Col18a1P39061 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC8.61□□□□□ -1.03
Col18a1P39061 AC108846.4-201ENSMUST00000216783 341 ntBASIC8.61□□□□□ -1.03
Col18a1P39061 AC153961.2-201ENSMUST00000218877 164 ntBASIC8.61□□□□□ -1.03
Col18a1P39061 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Col18a1P39061 Gprin2-203ENSMUST00000226613 10354 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Col18a1P39061 Gm26512-201ENSMUST00000181874 3042 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Col18a1P39061 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC8.6□□□□□ -1.03
Col18a1P39061 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Col18a1P39061 Patl2-201ENSMUST00000028665 2434 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Col18a1P39061 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Col18a1P39061 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Col18a1P39061 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Col18a1P39061 Arhgef9-207ENSMUST00000113885 4578 ntTSL 5 BASIC8.6□□□□□ -1.03
Col18a1P39061 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Col18a1P39061 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC8.6□□□□□ -1.03
Col18a1P39061 Gm43557-201ENSMUST00000197100 2370 ntBASIC8.6□□□□□ -1.03
Col18a1P39061 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Col18a1P39061 Flg2-201ENSMUST00000098884 7011 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Col18a1P39061 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Col18a1P39061 Gm4973-201ENSMUST00000206925 1334 ntBASIC8.6□□□□□ -1.03
Col18a1P39061 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Col18a1P39061 Gm14975-201ENSMUST00000118741 664 ntBASIC8.6□□□□□ -1.03
Col18a1P39061 Gm14783-201ENSMUST00000118900 663 ntBASIC8.6□□□□□ -1.03
Col18a1P39061 Gm15225-201ENSMUST00000120449 1017 ntBASIC8.6□□□□□ -1.03
Col18a1P39061 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC8.6□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms