Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm25505-201ENSMUST00000157220 246 ntBASIC7.18□□□□□ -1.26
Usp4P35123 Gm15795-201ENSMUST00000160969 553 ntBASIC7.18□□□□□ -1.26
Usp4P35123 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Usp4P35123 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC7.18□□□□□ -1.26
Usp4P35123 Gm8902-201ENSMUST00000174341 1096 ntBASIC7.18□□□□□ -1.26
Usp4P35123 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC7.18□□□□□ -1.26
Usp4P35123 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC7.18□□□□□ -1.26
Usp4P35123 Gm5334-201ENSMUST00000187472 720 ntBASIC7.18□□□□□ -1.26
Usp4P35123 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Usp4P35123 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Usp4P35123 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC7.18□□□□□ -1.26
Usp4P35123 Gm18593-201ENSMUST00000200754 1139 ntBASIC7.18□□□□□ -1.26
Usp4P35123 Gm44861-201ENSMUST00000208325 1220 ntBASIC7.18□□□□□ -1.26
Usp4P35123 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC7.18□□□□□ -1.26
Usp4P35123 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC7.18□□□□□ -1.26
Usp4P35123 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Usp4P35123 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC7.18□□□□□ -1.26
Usp4P35123 AC139568.1-201ENSMUST00000222878 486 ntBASIC7.18□□□□□ -1.26
Usp4P35123 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Usp4P35123 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Usp4P35123 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Usp4P35123 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Usp4P35123 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Usp4P35123 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Usp4P35123 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC7.18□□□□□ -1.26
Usp4P35123 Gm43343-201ENSMUST00000202454 1926 ntBASIC7.18□□□□□ -1.26
Usp4P35123 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC7.18□□□□□ -1.26
Usp4P35123 Gm44624-201ENSMUST00000208700 2278 ntBASIC7.18□□□□□ -1.26
Usp4P35123 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Usp4P35123 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Usp4P35123 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Usp4P35123 Mbnl2-203ENSMUST00000226800 3328 ntBASIC7.18□□□□□ -1.26
Usp4P35123 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Usp4P35123 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC7.18□□□□□ -1.26
Usp4P35123 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Usp4P35123 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Usp4P35123 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Usp4P35123 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Usp4P35123 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Usp4P35123 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Usp4P35123 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Usp4P35123 Gm44677-201ENSMUST00000209151 3739 ntBASIC7.17□□□□□ -1.26
Usp4P35123 Gm9521-201ENSMUST00000206656 1516 ntBASIC7.17□□□□□ -1.26
Usp4P35123 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
Usp4P35123 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Usp4P35123 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
Usp4P35123 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Usp4P35123 Gm37913-201ENSMUST00000192925 2544 ntBASIC7.17□□□□□ -1.26
Usp4P35123 Mir760-201ENSMUST00000103257 119 ntBASIC7.17□□□□□ -1.26
Usp4P35123 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Usp4P35123 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC7.17□□□□□ -1.26
Usp4P35123 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Usp4P35123 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Usp4P35123 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Usp4P35123 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Usp4P35123 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
Usp4P35123 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Usp4P35123 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC7.17□□□□□ -1.26
Usp4P35123 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC7.17□□□□□ -1.26
Usp4P35123 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Usp4P35123 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
Usp4P35123 Gm12465-201ENSMUST00000118591 300 ntBASIC7.17□□□□□ -1.26
Usp4P35123 Gm12748-201ENSMUST00000120763 504 ntBASIC7.17□□□□□ -1.26
Usp4P35123 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
Usp4P35123 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Usp4P35123 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC7.17□□□□□ -1.26
Usp4P35123 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Usp4P35123 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Usp4P35123 Gm26167-201ENSMUST00000158423 253 ntBASIC7.17□□□□□ -1.26
Usp4P35123 Gm23819-201ENSMUST00000158744 109 ntBASIC7.17□□□□□ -1.26
Usp4P35123 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC7.17□□□□□ -1.26
Usp4P35123 Gm26570-201ENSMUST00000180672 342 ntBASIC7.17□□□□□ -1.26
Usp4P35123 Gm26738-201ENSMUST00000181312 601 ntBASIC7.17□□□□□ -1.26
Usp4P35123 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC7.17□□□□□ -1.26
Usp4P35123 Ighv1-29-201ENSMUST00000194116 342 ntBASIC7.17□□□□□ -1.26
Usp4P35123 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Usp4P35123 Gm43895-201ENSMUST00000203219 855 ntBASIC7.17□□□□□ -1.26
Usp4P35123 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Usp4P35123 Gm19201-201ENSMUST00000210127 778 ntBASIC7.17□□□□□ -1.26
Usp4P35123 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC7.17□□□□□ -1.26
Usp4P35123 CT030175.1-201ENSMUST00000220822 408 ntBASIC7.17□□□□□ -1.26
Usp4P35123 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Usp4P35123 AC133598.3-204ENSMUST00000224260 767 ntBASIC7.17□□□□□ -1.26
Usp4P35123 Glycam1-204ENSMUST00000228895 641 ntBASIC7.17□□□□□ -1.26
Usp4P35123 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Usp4P35123 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Usp4P35123 Gm25131-201ENSMUST00000082653 151 ntBASIC7.17□□□□□ -1.26
Usp4P35123 Olfr1143-201ENSMUST00000090708 945 ntBASIC7.17□□□□□ -1.26
Usp4P35123 Gm7731-201ENSMUST00000091759 470 ntBASIC7.17□□□□□ -1.26
Usp4P35123 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Usp4P35123 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Usp4P35123 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Usp4P35123 Gm8700-201ENSMUST00000222187 3054 ntBASIC7.17□□□□□ -1.26
Usp4P35123 Gm28874-201ENSMUST00000190917 3134 ntBASIC7.17□□□□□ -1.26
Usp4P35123 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
Usp4P35123 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Usp4P35123 Gm5361-201ENSMUST00000211041 1498 ntBASIC7.17□□□□□ -1.26
Usp4P35123 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Usp4P35123 Gm16123-201ENSMUST00000118647 1517 ntBASIC7.17□□□□□ -1.26
Usp4P35123 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 148.9 ms