Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Lire1P11260 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Lire1P11260 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Lire1P11260 Gm10259-201ENSMUST00000091289 1590 ntBASIC6.49□□□□□ -1.37
Lire1P11260 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC6.49□□□□□ -1.37
Lire1P11260 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Lire1P11260 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Lire1P11260 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Lire1P11260 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC6.49□□□□□ -1.37
Lire1P11260 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC6.49□□□□□ -1.37
Lire1P11260 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Lire1P11260 Gm15422-201ENSMUST00000117453 541 ntBASIC6.49□□□□□ -1.37
Lire1P11260 Gm9429-201ENSMUST00000117804 868 ntBASIC6.49□□□□□ -1.37
Lire1P11260 Gm13156-201ENSMUST00000118348 321 ntBASIC6.49□□□□□ -1.37
Lire1P11260 Gm15538-201ENSMUST00000121410 313 ntBASIC6.49□□□□□ -1.37
Lire1P11260 Gm6027-201ENSMUST00000121467 756 ntBASIC6.49□□□□□ -1.37
Lire1P11260 Gm12929-201ENSMUST00000122406 370 ntBASIC6.49□□□□□ -1.37
Lire1P11260 Gm8089-201ENSMUST00000122463 968 ntBASIC6.49□□□□□ -1.37
Lire1P11260 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC6.49□□□□□ -1.37
Lire1P11260 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Lire1P11260 Gm24011-201ENSMUST00000157732 268 ntBASIC6.49□□□□□ -1.37
Lire1P11260 Gm23259-201ENSMUST00000158318 303 ntBASIC6.49□□□□□ -1.37
Lire1P11260 Gm22533-201ENSMUST00000158821 274 ntBASIC6.49□□□□□ -1.37
Lire1P11260 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC6.49□□□□□ -1.37
Lire1P11260 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Lire1P11260 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Lire1P11260 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Lire1P11260 Mir6403-201ENSMUST00000185007 129 ntBASIC6.49□□□□□ -1.37
Lire1P11260 Gm8004-201ENSMUST00000187782 617 ntBASIC6.49□□□□□ -1.37
Lire1P11260 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC6.49□□□□□ -1.37
Lire1P11260 Gm28507-201ENSMUST00000189737 703 ntBASIC6.49□□□□□ -1.37
Lire1P11260 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Lire1P11260 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC6.49□□□□□ -1.37
Lire1P11260 Gm44582-201ENSMUST00000209125 445 ntBASIC6.49□□□□□ -1.37
Lire1P11260 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC6.49□□□□□ -1.37
Lire1P11260 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Lire1P11260 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC6.49□□□□□ -1.37
Lire1P11260 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC6.49□□□□□ -1.37
Lire1P11260 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC6.49□□□□□ -1.37
Lire1P11260 AC161586.1-201ENSMUST00000223232 547 ntBASIC6.49□□□□□ -1.37
Lire1P11260 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC6.49□□□□□ -1.37
Lire1P11260 AC110176.1-201ENSMUST00000226219 504 ntBASIC6.49□□□□□ -1.37
Lire1P11260 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Lire1P11260 n-R5s41-201ENSMUST00000083025 119 ntBASIC6.49□□□□□ -1.37
Lire1P11260 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Lire1P11260 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Lire1P11260 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Lire1P11260 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Lire1P11260 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC6.49□□□□□ -1.37
Lire1P11260 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Lire1P11260 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Lire1P11260 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Lire1P11260 Gm17101-201ENSMUST00000169520 1588 ntBASIC6.48□□□□□ -1.37
Lire1P11260 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC6.48□□□□□ -1.37
Lire1P11260 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Lire1P11260 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Lire1P11260 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Lire1P11260 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Lire1P11260 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC6.48□□□□□ -1.37
Lire1P11260 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Lire1P11260 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Lire1P11260 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Lire1P11260 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Lire1P11260 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC6.48□□□□□ -1.37
Lire1P11260 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Lire1P11260 Gm42671-201ENSMUST00000198013 1604 ntBASIC6.48□□□□□ -1.37
Lire1P11260 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Lire1P11260 Gm43789-201ENSMUST00000199275 2472 ntBASIC6.48□□□□□ -1.37
Lire1P11260 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
Lire1P11260 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Lire1P11260 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Lire1P11260 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Lire1P11260 Gm13423-201ENSMUST00000117205 888 ntBASIC6.48□□□□□ -1.37
Lire1P11260 Gm6743-201ENSMUST00000117345 1066 ntBASIC6.48□□□□□ -1.37
Lire1P11260 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC6.48□□□□□ -1.37
Lire1P11260 Gm12653-201ENSMUST00000117778 561 ntBASIC6.48□□□□□ -1.37
Lire1P11260 Gm13130-201ENSMUST00000119195 1166 ntBASIC6.48□□□□□ -1.37
Lire1P11260 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Lire1P11260 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC6.48□□□□□ -1.37
Lire1P11260 Gm26353-201ENSMUST00000158224 255 ntBASIC6.48□□□□□ -1.37
Lire1P11260 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Lire1P11260 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC6.48□□□□□ -1.37
Lire1P11260 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC6.48□□□□□ -1.37
Lire1P11260 Gm3208-201ENSMUST00000168281 427 ntBASIC6.48□□□□□ -1.37
Lire1P11260 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Lire1P11260 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Lire1P11260 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC6.48□□□□□ -1.37
Lire1P11260 Gm28117-201ENSMUST00000188472 371 ntBASIC6.48□□□□□ -1.37
Lire1P11260 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Lire1P11260 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Lire1P11260 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC6.48□□□□□ -1.37
Lire1P11260 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC6.48□□□□□ -1.37
Lire1P11260 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC6.48□□□□□ -1.37
Lire1P11260 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
Lire1P11260 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC6.48□□□□□ -1.37
Lire1P11260 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Lire1P11260 AC154627.1-201ENSMUST00000228799 1286 ntBASIC6.48□□□□□ -1.37
Lire1P11260 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Lire1P11260 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Lire1P11260 n-R5s60-201ENSMUST00000083299 119 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms