Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC7.04□□□□□ -1.28
Chmp6P0C0A3 Gm38178-201ENSMUST00000194502 2471 ntBASIC7.04□□□□□ -1.28
Chmp6P0C0A3 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Chmp6P0C0A3 AC159006.2-201ENSMUST00000228734 4144 ntBASIC7.04□□□□□ -1.28
Chmp6P0C0A3 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Chmp6P0C0A3 Gm38366-201ENSMUST00000193127 1934 ntBASIC7.04□□□□□ -1.28
Chmp6P0C0A3 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC7.04□□□□□ -1.28
Chmp6P0C0A3 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Chmp6P0C0A3 Gm26079-201ENSMUST00000104066 133 ntBASIC7.04□□□□□ -1.28
Chmp6P0C0A3 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC7.04□□□□□ -1.28
Chmp6P0C0A3 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Chmp6P0C0A3 Gm22820-201ENSMUST00000157205 329 ntBASIC7.04□□□□□ -1.28
Chmp6P0C0A3 Gm3585-201ENSMUST00000173438 875 ntBASIC7.04□□□□□ -1.28
Chmp6P0C0A3 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Chmp6P0C0A3 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC7.04□□□□□ -1.28
Chmp6P0C0A3 Igkv4-83-201ENSMUST00000196933 334 ntBASIC7.04□□□□□ -1.28
Chmp6P0C0A3 Gm17834-201ENSMUST00000204322 891 ntBASIC7.04□□□□□ -1.28
Chmp6P0C0A3 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Chmp6P0C0A3 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC7.04□□□□□ -1.28
Chmp6P0C0A3 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Chmp6P0C0A3 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Chmp6P0C0A3 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC7.04□□□□□ -1.28
Chmp6P0C0A3 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Chmp6P0C0A3 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Chmp6P0C0A3 Gm15789-201ENSMUST00000118992 1359 ntBASIC7.04□□□□□ -1.28
Chmp6P0C0A3 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Chmp6P0C0A3 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC7.04□□□□□ -1.28
Chmp6P0C0A3 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Chmp6P0C0A3 AC158537.1-201ENSMUST00000224637 1711 ntBASIC7.04□□□□□ -1.28
Chmp6P0C0A3 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Chmp6P0C0A3 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
Chmp6P0C0A3 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
Chmp6P0C0A3 AC153143.2-201ENSMUST00000220999 1804 ntBASIC7.04□□□□□ -1.28
Chmp6P0C0A3 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Chmp6P0C0A3 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Chmp6P0C0A3 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Chmp6P0C0A3 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Gm37142-201ENSMUST00000193718 3110 ntBASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Gm37086-201ENSMUST00000193082 3452 ntBASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Gm37234-201ENSMUST00000193259 1441 ntBASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
Chmp6P0C0A3 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Gm4997-201ENSMUST00000154056 360 ntBASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Gm23071-201ENSMUST00000158242 115 ntBASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Gm9064-201ENSMUST00000163579 566 ntBASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Gm2619-202ENSMUST00000166777 651 ntBASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Mir3471-2-201ENSMUST00000174896 102 ntBASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Gm23968-201ENSMUST00000175047 125 ntBASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Gm9274-201ENSMUST00000182505 984 ntBASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Gm27295-201ENSMUST00000184264 153 ntBASIC7.03□□□□□ -1.28
Chmp6P0C0A3 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Chmp6P0C0A3 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Gm43436-201ENSMUST00000199308 147 ntBASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Gm7769-201ENSMUST00000212900 933 ntBASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Gm19324-201ENSMUST00000213229 1169 ntBASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Chmp6P0C0A3 CT009757.4-201ENSMUST00000221520 2541 ntBASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Gm14896-201ENSMUST00000121311 1351 ntBASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Gm37772-201ENSMUST00000191635 1394 ntBASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Chmp6P0C0A3 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
Chmp6P0C0A3 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
Chmp6P0C0A3 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
Chmp6P0C0A3 Gm45297-201ENSMUST00000209893 3483 ntBASIC7.02□□□□□ -1.29
Chmp6P0C0A3 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Chmp6P0C0A3 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Chmp6P0C0A3 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms