Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Pdzrn4-201ENSMUST00000035399 3393 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Hoxd3P09027 Olfr523-203ENSMUST00000213953 3445 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Hoxd3P09027 Gm12378-201ENSMUST00000116171 1461 ntBASIC6.39□□□□□ -1.39
Hoxd3P09027 Adgrg1-201ENSMUST00000093271 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hoxd3P09027 Psg-ps1-201ENSMUST00000165490 1574 ntBASIC6.39□□□□□ -1.39
Hoxd3P09027 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hoxd3P09027 Gm37065-203ENSMUST00000192498 1622 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Hoxd3P09027 Gm45790-201ENSMUST00000211986 1629 ntTSL 5 BASIC6.39□□□□□ -1.39
Hoxd3P09027 Gm44102-201ENSMUST00000204031 1666 ntBASIC6.39□□□□□ -1.39
Hoxd3P09027 Cdh26-201ENSMUST00000042092 2891 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hoxd3P09027 Gm43776-201ENSMUST00000199729 2914 ntBASIC6.39□□□□□ -1.39
Hoxd3P09027 Gm40309-201ENSMUST00000202699 1752 ntBASIC6.39□□□□□ -1.39
Hoxd3P09027 Smpd4-209ENSMUST00000165363 3046 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Hoxd3P09027 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hoxd3P09027 Cyp2c50-202ENSMUST00000080171 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hoxd3P09027 Zfp488-201ENSMUST00000166737 4301 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hoxd3P09027 Frrs1-202ENSMUST00000195905 6823 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Hoxd3P09027 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hoxd3P09027 Gm43420-201ENSMUST00000198012 1857 ntBASIC6.39□□□□□ -1.39
Hoxd3P09027 Gm37170-201ENSMUST00000194488 1934 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Hoxd3P09027 A330076C08Rik-202ENSMUST00000223513 1937 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Hoxd3P09027 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Hoxd3P09027 Supt5-201ENSMUST00000003527 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hoxd3P09027 Serpina3f-202ENSMUST00000121337 2248 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm15577-201ENSMUST00000144350 2293 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Hoxd3P09027 AC121997.2-201ENSMUST00000228095 2294 ntBASIC6.38□□□□□ -1.39
Hoxd3P09027 Nsun3-201ENSMUST00000063089 3813 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hoxd3P09027 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Hoxd3P09027 Vmn2r-ps95-201ENSMUST00000222423 2316 ntBASIC6.38□□□□□ -1.39
Hoxd3P09027 Adgrl2-220ENSMUST00000200543 5509 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
Hoxd3P09027 Hnrnph2-204ENSMUST00000113202 3988 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Hoxd3P09027 Wipf3-205ENSMUST00000163746 4102 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm43544-201ENSMUST00000196474 2472 ntBASIC6.38□□□□□ -1.39
Hoxd3P09027 CT025600.1-202ENSMUST00000220264 2510 ntTSL 5 BASIC6.38□□□□□ -1.39
Hoxd3P09027 Fam160a1-202ENSMUST00000118408 4445 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Hoxd3P09027 Cep95-201ENSMUST00000018516 2696 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hoxd3P09027 Cfap44-201ENSMUST00000099742 6583 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Hoxd3P09027 Olfr1312-202ENSMUST00000213582 2891 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Hoxd3P09027 Slc16a14-201ENSMUST00000027422 3207 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm45477-201ENSMUST00000200213 5498 ntBASIC6.38□□□□□ -1.39
Hoxd3P09027 Aldh18a1-207ENSMUST00000176939 3427 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hoxd3P09027 4833420G17Rik-203ENSMUST00000224312 3406 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Hoxd3P09027 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Hoxd3P09027 Ghrh-202ENSMUST00000109536 503 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm12077-201ENSMUST00000117049 364 ntBASIC6.38□□□□□ -1.39
Hoxd3P09027 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC6.38□□□□□ -1.39
Hoxd3P09027 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC6.38□□□□□ -1.39
Hoxd3P09027 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm13325-201ENSMUST00000118746 806 ntBASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm14414-201ENSMUST00000120833 573 ntBASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm22478-201ENSMUST00000122570 154 ntBASIC6.38□□□□□ -1.39
Hoxd3P09027 1700092C02Rik-201ENSMUST00000134397 359 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm13269-201ENSMUST00000143458 655 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC6.38□□□□□ -1.39
Hoxd3P09027 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm25902-201ENSMUST00000158493 318 ntBASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm22202-201ENSMUST00000158608 311 ntBASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm23824-201ENSMUST00000158741 276 ntBASIC6.38□□□□□ -1.39
Hoxd3P09027 0610012D04Rik-201ENSMUST00000159031 531 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm17572-201ENSMUST00000171455 420 ntBASIC6.38□□□□□ -1.39
Hoxd3P09027 Sfta2-202ENSMUST00000174521 649 ntTSL 3 BASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm9529-201ENSMUST00000177598 579 ntBASIC6.38□□□□□ -1.39
Hoxd3P09027 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Hoxd3P09027 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC6.38□□□□□ -1.39
Hoxd3P09027 Milr1-208ENSMUST00000183111 982 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm27288-201ENSMUST00000184215 80 ntBASIC6.38□□□□□ -1.39
Hoxd3P09027 Mir7115-201ENSMUST00000184275 64 ntBASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm27597-201ENSMUST00000184365 80 ntBASIC6.38□□□□□ -1.39
Hoxd3P09027 Mir6912-201ENSMUST00000184456 70 ntBASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm27506-201ENSMUST00000184558 80 ntBASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm27529-201ENSMUST00000184975 80 ntBASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm27907-201ENSMUST00000185101 80 ntBASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm28126-201ENSMUST00000185286 356 ntTSL 5 BASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm28421-201ENSMUST00000186378 356 ntTSL 5 BASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm28212-201ENSMUST00000187114 356 ntTSL 5 BASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm28412-201ENSMUST00000187243 177 ntBASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm28355-201ENSMUST00000187443 356 ntTSL 5 BASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm29568-201ENSMUST00000187884 356 ntTSL 5 BASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm29080-201ENSMUST00000188565 356 ntTSL 5 BASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm28944-201ENSMUST00000188946 356 ntTSL 5 BASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm28908-201ENSMUST00000189002 356 ntTSL 5 BASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm29078-201ENSMUST00000190611 356 ntTSL 5 BASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm38164-201ENSMUST00000192810 330 ntBASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm34217-201ENSMUST00000193562 356 ntTSL 5 BASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm19148-201ENSMUST00000197045 429 ntBASIC6.38□□□□□ -1.39
Hoxd3P09027 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Hoxd3P09027 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC6.38□□□□□ -1.39
Hoxd3P09027 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm5981-201ENSMUST00000199912 487 ntBASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm42884-201ENSMUST00000200729 422 ntTSL 2 BASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm44055-201ENSMUST00000204376 247 ntBASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm45255-201ENSMUST00000209943 811 ntBASIC6.38□□□□□ -1.39
Hoxd3P09027 Pvrig-201ENSMUST00000211088 1080 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Hoxd3P09027 Gm7151-201ENSMUST00000211511 954 ntBASIC6.38□□□□□ -1.39
Hoxd3P09027 AC160338.2-201ENSMUST00000215508 281 ntTSL 5 BASIC6.38□□□□□ -1.39
Hoxd3P09027 Olfr32-206ENSMUST00000215765 1241 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
Hoxd3P09027 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC6.38□□□□□ -1.39
Hoxd3P09027 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC6.38□□□□□ -1.39
Hoxd3P09027 AC131745.1-201ENSMUST00000223660 330 ntBASIC6.38□□□□□ -1.39
Hoxd3P09027 AC144798.1-201ENSMUST00000228120 391 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms