Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Rreb1-210ENSMUST00000149745 4320 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Col4a6B1AVK5 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Slc43a2-201ENSMUST00000042561 6891 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Ankrd6-203ENSMUST00000084749 4573 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Gm22952-201ENSMUST00000116720 120 ntBASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Mir466f-4-201ENSMUST00000116930 121 ntBASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Gm5073-201ENSMUST00000118222 820 ntBASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Gm12768-201ENSMUST00000120055 759 ntBASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Gm12181-201ENSMUST00000121448 531 ntBASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Gm15096-201ENSMUST00000121918 878 ntBASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Gm23669-201ENSMUST00000157470 128 ntBASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Gm23757-201ENSMUST00000158353 100 ntBASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Gm25603-201ENSMUST00000158361 105 ntBASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Gm25487-201ENSMUST00000158725 125 ntBASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Gm22690-201ENSMUST00000175054 110 ntBASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Gm23806-201ENSMUST00000175157 109 ntBASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC6.64□□□□□ -1.35
Col4a6B1AVK5 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Ighv5-19-201ENSMUST00000193466 297 ntBASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC6.64□□□□□ -1.35
Col4a6B1AVK5 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Gm9237-201ENSMUST00000221499 548 ntBASIC6.64□□□□□ -1.35
Col4a6B1AVK5 AC113198.1-201ENSMUST00000226353 832 ntBASIC6.64□□□□□ -1.35
Col4a6B1AVK5 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Pet2-201ENSMUST00000113959 4183 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Pet2-202ENSMUST00000113960 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Tenm4-201ENSMUST00000107162 11021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Adgrl2-212ENSMUST00000198779 4592 ntTSL 5 BASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col4a6B1AVK5 AC159886.2-201ENSMUST00000214737 2740 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col4a6B1AVK5 AC112142.1-203ENSMUST00000228670 2472 ntBASIC6.63□□□□□ -1.35
Col4a6B1AVK5 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col4a6B1AVK5 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col4a6B1AVK5 Atp2b4-203ENSMUST00000125659 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col4a6B1AVK5 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col4a6B1AVK5 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col4a6B1AVK5 Etv5-203ENSMUST00000168774 3773 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col4a6B1AVK5 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col4a6B1AVK5 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC6.63□□□□□ -1.35
Col4a6B1AVK5 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC6.63□□□□□ -1.35
Col4a6B1AVK5 Dock9-206ENSMUST00000212181 7368 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col4a6B1AVK5 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col4a6B1AVK5 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col4a6B1AVK5 Ctnnd1-210ENSMUST00000111684 6021 ntTSL 5 BASIC6.63□□□□□ -1.35
Col4a6B1AVK5 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC6.63□□□□□ -1.35
Col4a6B1AVK5 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Col4a6B1AVK5 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col4a6B1AVK5 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Col4a6B1AVK5 Gm7048-201ENSMUST00000199395 1891 ntBASIC6.63□□□□□ -1.35
Col4a6B1AVK5 Gm12193-201ENSMUST00000117250 379 ntBASIC6.63□□□□□ -1.35
Col4a6B1AVK5 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC6.63□□□□□ -1.35
Col4a6B1AVK5 Gm27006-201ENSMUST00000182218 943 ntBASIC6.63□□□□□ -1.35
Col4a6B1AVK5 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC6.63□□□□□ -1.35
Col4a6B1AVK5 Gm45750-201ENSMUST00000211966 354 ntBASIC6.63□□□□□ -1.35
Col4a6B1AVK5 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC6.63□□□□□ -1.35
Col4a6B1AVK5 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC6.63□□□□□ -1.35
Col4a6B1AVK5 Gm8863-201ENSMUST00000216630 926 ntBASIC6.63□□□□□ -1.35
Col4a6B1AVK5 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC6.63□□□□□ -1.35
Col4a6B1AVK5 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col4a6B1AVK5 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col4a6B1AVK5 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col4a6B1AVK5 Med1-201ENSMUST00000018304 5845 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col4a6B1AVK5 Fam135b-201ENSMUST00000022953 4623 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Col4a6B1AVK5 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC6.63□□□□□ -1.35
Col4a6B1AVK5 AC126549.1-201ENSMUST00000225044 3687 ntBASIC6.63□□□□□ -1.35
Col4a6B1AVK5 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col4a6B1AVK5 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
Col4a6B1AVK5 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Col4a6B1AVK5 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col4a6B1AVK5 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Col4a6B1AVK5 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Col4a6B1AVK5 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Col4a6B1AVK5 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col4a6B1AVK5 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col4a6B1AVK5 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col4a6B1AVK5 C78859-201ENSMUST00000212800 5943 ntBASIC6.63□□□□□ -1.35
Col4a6B1AVK5 Ctnnd1-215ENSMUST00000111689 5961 ntTSL 5 BASIC6.63□□□□□ -1.35
Col4a6B1AVK5 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col4a6B1AVK5 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
Col4a6B1AVK5 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Col4a6B1AVK5 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC6.62□□□□□ -1.35
Col4a6B1AVK5 Pcdh15-226ENSMUST00000151116 6287 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Col4a6B1AVK5 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col4a6B1AVK5 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col4a6B1AVK5 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col4a6B1AVK5 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col4a6B1AVK5 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Col4a6B1AVK5 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col4a6B1AVK5 Cltc-202ENSMUST00000103186 6519 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 113.9 ms