Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm12695-201ENSMUST00000107071 1904 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Col6a4A2AX52 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a4A2AX52 Rbpj-201ENSMUST00000037618 5459 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a4A2AX52 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a4A2AX52 Amy1-202ENSMUST00000106540 1771 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a4A2AX52 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC5.48□□□□□ -1.53
Col6a4A2AX52 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Col6a4A2AX52 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Gm15233-201ENSMUST00000118747 400 ntBASIC5.47□□□□□ -1.53
Col6a4A2AX52 Gm23408-201ENSMUST00000158523 265 ntBASIC5.47□□□□□ -1.53
Col6a4A2AX52 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Gm27219-201ENSMUST00000184633 742 ntBASIC5.47□□□□□ -1.53
Col6a4A2AX52 Gm27355-201ENSMUST00000185045 128 ntBASIC5.47□□□□□ -1.53
Col6a4A2AX52 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Mir6994-201ENSMUST00000198985 73 ntBASIC5.47□□□□□ -1.53
Col6a4A2AX52 Gm45127-201ENSMUST00000205984 1015 ntBASIC5.47□□□□□ -1.53
Col6a4A2AX52 AC105950.1-201ENSMUST00000222637 408 ntBASIC5.47□□□□□ -1.53
Col6a4A2AX52 AC170086.2-201ENSMUST00000224733 803 ntBASIC5.47□□□□□ -1.53
Col6a4A2AX52 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Gm6117-201ENSMUST00000150540 1333 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
Col6a4A2AX52 AC158988.1-201ENSMUST00000226731 2624 ntBASIC5.47□□□□□ -1.53
Col6a4A2AX52 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Folh1-202ENSMUST00000107271 2516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a4A2AX52 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC5.47□□□□□ -1.53
Col6a4A2AX52 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Gm26079-201ENSMUST00000104066 133 ntBASIC5.47□□□□□ -1.53
Col6a4A2AX52 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Gm15621-201ENSMUST00000119162 364 ntBASIC5.47□□□□□ -1.53
Col6a4A2AX52 Gm15781-201ENSMUST00000120216 323 ntBASIC5.47□□□□□ -1.53
Col6a4A2AX52 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Col6a4A2AX52 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Gm35013-201ENSMUST00000197218 832 ntBASIC5.47□□□□□ -1.53
Col6a4A2AX52 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC5.47□□□□□ -1.53
Col6a4A2AX52 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Gm15732-201ENSMUST00000079794 480 ntBASIC5.47□□□□□ -1.53
Col6a4A2AX52 Gm26130-201ENSMUST00000083171 138 ntBASIC5.47□□□□□ -1.53
Col6a4A2AX52 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a4A2AX52 AC122828.2-201ENSMUST00000222511 2880 ntBASIC5.47□□□□□ -1.53
Col6a4A2AX52 Ces2b-201ENSMUST00000059449 3408 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Olfr1426-204ENSMUST00000219005 2507 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Col6a4A2AX52 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a4A2AX52 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Gm42507-201ENSMUST00000201187 2555 ntBASIC5.47□□□□□ -1.53
Col6a4A2AX52 Havcr1-202ENSMUST00000081819 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Gbp11-201ENSMUST00000100960 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a4A2AX52 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Col6a4A2AX52 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC5.46□□□□□ -1.53
Col6a4A2AX52 Gm43557-201ENSMUST00000197100 2370 ntBASIC5.46□□□□□ -1.53
Col6a4A2AX52 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
Col6a4A2AX52 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
Col6a4A2AX52 Vmn1r44-212ENSMUST00000228183 1838 ntBASIC5.46□□□□□ -1.53
Col6a4A2AX52 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Col6a4A2AX52 Gm10650-202ENSMUST00000196581 1969 ntBASIC5.46□□□□□ -1.53
Col6a4A2AX52 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Erbin-203ENSMUST00000091269 6224 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Gm22714-201ENSMUST00000116894 78 ntBASIC5.46□□□□□ -1.54
Col6a4A2AX52 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC5.46□□□□□ -1.54
Col6a4A2AX52 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Gm18849-201ENSMUST00000189861 560 ntBASIC5.46□□□□□ -1.54
Col6a4A2AX52 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Col6a4A2AX52 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms