Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Trav3n-2-201ENSMUST00000197693 334 ntBASIC6.72□□□□□ -1.33
Scn1aA2APX8 Trav3d-2-201ENSMUST00000199874 334 ntBASIC6.72□□□□□ -1.33
Scn1aA2APX8 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC6.72□□□□□ -1.33
Scn1aA2APX8 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC6.72□□□□□ -1.33
Scn1aA2APX8 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC6.72□□□□□ -1.33
Scn1aA2APX8 Gm33312-201ENSMUST00000222443 332 ntBASIC6.72□□□□□ -1.33
Scn1aA2APX8 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Scn1aA2APX8 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Scn1aA2APX8 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Scn1aA2APX8 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Scn1aA2APX8 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Scn1aA2APX8 Gm45117-201ENSMUST00000207250 1774 ntBASIC6.72□□□□□ -1.33
Scn1aA2APX8 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Scn1aA2APX8 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Scn1aA2APX8 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Scn1aA2APX8 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Scn1aA2APX8 Gm38156-201ENSMUST00000194601 2260 ntBASIC6.72□□□□□ -1.33
Scn1aA2APX8 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Scn1aA2APX8 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Scn1aA2APX8 Gm36981-201ENSMUST00000192340 4485 ntBASIC6.71□□□□□ -1.33
Scn1aA2APX8 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Scn1aA2APX8 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC6.71□□□□□ -1.33
Scn1aA2APX8 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC6.71□□□□□ -1.33
Scn1aA2APX8 E330013P04Rik-203ENSMUST00000190698 2996 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Scn1aA2APX8 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Scn1aA2APX8 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Scn1aA2APX8 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Scn1aA2APX8 Gm22710-201ENSMUST00000116892 125 ntBASIC6.71□□□□□ -1.33
Scn1aA2APX8 Gm7058-201ENSMUST00000119209 902 ntBASIC6.71□□□□□ -1.33
Scn1aA2APX8 Gm14098-201ENSMUST00000119295 623 ntBASIC6.71□□□□□ -1.33
Scn1aA2APX8 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Scn1aA2APX8 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC6.71□□□□□ -1.33
Scn1aA2APX8 Gm14457-201ENSMUST00000148069 1161 ntBASIC6.71□□□□□ -1.33
Scn1aA2APX8 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Scn1aA2APX8 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC6.71□□□□□ -1.33
Scn1aA2APX8 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC6.71□□□□□ -1.33
Scn1aA2APX8 Gm24435-201ENSMUST00000157886 110 ntBASIC6.71□□□□□ -1.33
Scn1aA2APX8 Gm17137-202ENSMUST00000165729 957 ntBASIC6.71□□□□□ -1.33
Scn1aA2APX8 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC6.71□□□□□ -1.33
Scn1aA2APX8 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Scn1aA2APX8 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Scn1aA2APX8 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC6.71□□□□□ -1.33
Scn1aA2APX8 Gm5306-201ENSMUST00000203325 757 ntBASIC6.71□□□□□ -1.33
Scn1aA2APX8 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC6.71□□□□□ -1.33
Scn1aA2APX8 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Scn1aA2APX8 Gm9292-201ENSMUST00000222008 710 ntBASIC6.71□□□□□ -1.33
Scn1aA2APX8 AC122459.2-201ENSMUST00000227099 638 ntBASIC6.71□□□□□ -1.33
Scn1aA2APX8 n-R5s89-201ENSMUST00000083532 104 ntBASIC6.71□□□□□ -1.33
Scn1aA2APX8 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC6.71□□□□□ -1.33
Scn1aA2APX8 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
Scn1aA2APX8 Gm7048-201ENSMUST00000199395 1891 ntBASIC6.71□□□□□ -1.34
Scn1aA2APX8 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Scn1aA2APX8 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
Scn1aA2APX8 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Scn1aA2APX8 Akt3-201ENSMUST00000019843 1511 ntTSL 5 BASIC6.71□□□□□ -1.34
Scn1aA2APX8 Gm42544-201ENSMUST00000197868 3242 ntBASIC6.71□□□□□ -1.34
Scn1aA2APX8 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Scn1aA2APX8 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Scn1aA2APX8 Gm14772-201ENSMUST00000116562 514 ntBASIC6.71□□□□□ -1.34
Scn1aA2APX8 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC6.71□□□□□ -1.34
Scn1aA2APX8 Gm27512-201ENSMUST00000175328 126 ntBASIC6.71□□□□□ -1.34
Scn1aA2APX8 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Scn1aA2APX8 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC6.71□□□□□ -1.34
Scn1aA2APX8 Gm44809-201ENSMUST00000208305 993 ntBASIC6.71□□□□□ -1.34
Scn1aA2APX8 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC6.71□□□□□ -1.34
Scn1aA2APX8 Gm8256-203ENSMUST00000228692 591 ntBASIC6.71□□□□□ -1.34
Scn1aA2APX8 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Scn1aA2APX8 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Scn1aA2APX8 Gm6990-201ENSMUST00000086830 348 ntBASIC6.71□□□□□ -1.34
Scn1aA2APX8 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Scn1aA2APX8 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Scn1aA2APX8 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Scn1aA2APX8 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Scn1aA2APX8 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
Scn1aA2APX8 Gm44039-201ENSMUST00000204192 2246 ntBASIC6.7□□□□□ -1.34
Scn1aA2APX8 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Scn1aA2APX8 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Scn1aA2APX8 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC6.7□□□□□ -1.34
Scn1aA2APX8 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Scn1aA2APX8 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Scn1aA2APX8 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
Scn1aA2APX8 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC6.7□□□□□ -1.34
Scn1aA2APX8 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Scn1aA2APX8 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Scn1aA2APX8 Gm12518-201ENSMUST00000122075 779 ntBASIC6.7□□□□□ -1.34
Scn1aA2APX8 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Scn1aA2APX8 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Scn1aA2APX8 Gm24179-201ENSMUST00000158925 127 ntBASIC6.7□□□□□ -1.34
Scn1aA2APX8 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC6.7□□□□□ -1.34
Scn1aA2APX8 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC6.7□□□□□ -1.34
Scn1aA2APX8 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Scn1aA2APX8 Gm22655-201ENSMUST00000174949 96 ntBASIC6.7□□□□□ -1.34
Scn1aA2APX8 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC6.7□□□□□ -1.34
Scn1aA2APX8 Gm15257-201ENSMUST00000177680 883 ntBASIC6.7□□□□□ -1.34
Scn1aA2APX8 Gm15252-201ENSMUST00000177750 883 ntBASIC6.7□□□□□ -1.34
Scn1aA2APX8 Gm15256-201ENSMUST00000177793 883 ntBASIC6.7□□□□□ -1.34
Scn1aA2APX8 Gm15260-201ENSMUST00000179402 883 ntBASIC6.7□□□□□ -1.34
Scn1aA2APX8 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC6.7□□□□□ -1.34
Scn1aA2APX8 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Scn1aA2APX8 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC6.7□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms