Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
Trim3Q9R1R2 AC132833.4-201ENSMUST00000228313 203 ntBASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC6.19□□□□□ -1.42
Trim3Q9R1R2 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Gm4073-201ENSMUST00000176792 3500 ntBASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Trim3Q9R1R2 AC159006.2-201ENSMUST00000228734 4144 ntBASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
Trim3Q9R1R2 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Trim3Q9R1R2 AC160028.2-201ENSMUST00000218937 2519 ntBASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Gm44843-201ENSMUST00000208320 1396 ntBASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Trim3Q9R1R2 AC161247.1-201ENSMUST00000217744 2295 ntBASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Mir674-201ENSMUST00000102421 100 ntBASIC6.18□□□□□ -1.42
Trim3Q9R1R2 n-R5s172-201ENSMUST00000104508 114 ntBASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Gm14489-201ENSMUST00000120868 901 ntBASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Gm14847-201ENSMUST00000121978 519 ntBASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Gm12175-201ENSMUST00000122081 345 ntBASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Mir1903-201ENSMUST00000122574 80 ntBASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Gm22642-201ENSMUST00000175352 252 ntBASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim3Q9R1R2 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Gm29197-201ENSMUST00000185922 702 ntBASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Gm29605-201ENSMUST00000190800 292 ntBASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Gm43063-201ENSMUST00000198198 1081 ntBASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Gm43089-201ENSMUST00000199162 275 ntBASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim3Q9R1R2 AC153971.1-201ENSMUST00000215097 3811 ntBASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Olfr923-204ENSMUST00000219798 1068 ntBASIC6.18□□□□□ -1.42
Trim3Q9R1R2 AC154558.1-201ENSMUST00000222278 415 ntBASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Gm2139-201ENSMUST00000222569 1075 ntBASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Gm9267-201ENSMUST00000222831 404 ntBASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Gm7252-201ENSMUST00000223284 456 ntBASIC6.18□□□□□ -1.42
Trim3Q9R1R2 AC123917.1-201ENSMUST00000228063 1048 ntBASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Gpr87-201ENSMUST00000056898 1080 ntBASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Mir7b-201ENSMUST00000083557 111 ntBASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Gm43880-201ENSMUST00000203635 2162 ntBASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Gm37518-201ENSMUST00000194930 2603 ntBASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim3Q9R1R2 AC125328.1-201ENSMUST00000226812 2265 ntBASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC6.18□□□□□ -1.42
Trim3Q9R1R2 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Gm38366-201ENSMUST00000193127 1934 ntBASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Gm43343-201ENSMUST00000202454 1926 ntBASIC6.17□□□□□ -1.42
Trim3Q9R1R2 AC141476.1-201ENSMUST00000224988 3387 ntBASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Gm43330-201ENSMUST00000199706 2153 ntBASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Gm11590-201ENSMUST00000118999 1455 ntBASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Gm43335-201ENSMUST00000198299 3276 ntBASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Gm38156-201ENSMUST00000194601 2260 ntBASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trim3Q9R1R2 Gm25877-201ENSMUST00000104326 129 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 116.5 ms