Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdc40Q9DC48 AC139350.2-201ENSMUST00000226508 2331 ntBASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Gm10258-201ENSMUST00000091270 2123 ntBASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
Cdc40Q9DC48 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Gm16123-201ENSMUST00000118647 1517 ntBASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Gm26340-201ENSMUST00000102365 99 ntBASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Gm25785-201ENSMUST00000104129 125 ntBASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Gm9506-201ENSMUST00000118516 320 ntBASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Gm6382-201ENSMUST00000118873 942 ntBASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Gm15311-201ENSMUST00000119682 282 ntBASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Gm15305-201ENSMUST00000120354 288 ntBASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Gm11472-201ENSMUST00000121305 556 ntBASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Gm14747-201ENSMUST00000149888 984 ntBASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Gm22523-201ENSMUST00000158696 100 ntBASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Gm23810-201ENSMUST00000175150 74 ntBASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Gm27152-201ENSMUST00000183828 99 ntBASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Gm28586-201ENSMUST00000189857 456 ntBASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC6.11□□□□□ -1.43
Cdc40Q9DC48 AC122844.1-201ENSMUST00000195971 107 ntBASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Gm18781-201ENSMUST00000211252 924 ntBASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Gm17849-201ENSMUST00000219788 853 ntBASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdc40Q9DC48 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdc40Q9DC48 AC164295.1-201ENSMUST00000224861 186 ntBASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Gm43410-201ENSMUST00000197510 2234 ntBASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Gm43612-201ENSMUST00000196087 3207 ntBASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Gm43421-201ENSMUST00000200044 2905 ntBASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdc40Q9DC48 Gm43557-201ENSMUST00000197100 2370 ntBASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Cdc40Q9DC48 AC122305.1-201ENSMUST00000214803 3921 ntBASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Cdc40Q9DC48 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Cdc40Q9DC48 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Gm11107-201ENSMUST00000165414 505 ntBASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Gm20615-201ENSMUST00000177503 705 ntBASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Gm25244-201ENSMUST00000178089 132 ntBASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Gm27186-201ENSMUST00000184223 307 ntBASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Gm18849-201ENSMUST00000189861 560 ntBASIC6.1□□□□□ -1.43
Cdc40Q9DC48 Gm35323-201ENSMUST00000191836 499 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms