Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm4732-201ENSMUST00000118778 473 ntBASIC7.2□□□□□ -1.26
Ddx56Q9D0R4 Gm5319-201ENSMUST00000118965 873 ntBASIC7.2□□□□□ -1.26
Ddx56Q9D0R4 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC7.2□□□□□ -1.26
Ddx56Q9D0R4 Gm6451-201ENSMUST00000121488 717 ntBASIC7.2□□□□□ -1.26
Ddx56Q9D0R4 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Ddx56Q9D0R4 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Ddx56Q9D0R4 Gm23031-201ENSMUST00000157998 119 ntBASIC7.2□□□□□ -1.26
Ddx56Q9D0R4 Gm25839-201ENSMUST00000158921 103 ntBASIC7.2□□□□□ -1.26
Ddx56Q9D0R4 Gm17223-201ENSMUST00000171413 481 ntBASIC7.2□□□□□ -1.26
Ddx56Q9D0R4 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC7.2□□□□□ -1.26
Ddx56Q9D0R4 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
Ddx56Q9D0R4 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC7.2□□□□□ -1.26
Ddx56Q9D0R4 AC153899.1-201ENSMUST00000214092 1117 ntBASIC7.2□□□□□ -1.26
Ddx56Q9D0R4 AC121912.1-201ENSMUST00000227525 1201 ntBASIC7.2□□□□□ -1.26
Ddx56Q9D0R4 CT009515.1-201ENSMUST00000228127 586 ntBASIC7.2□□□□□ -1.26
Ddx56Q9D0R4 n-R5s169-201ENSMUST00000083110 120 ntBASIC7.2□□□□□ -1.26
Ddx56Q9D0R4 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC7.2□□□□□ -1.26
Ddx56Q9D0R4 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Ddx56Q9D0R4 Gm4073-201ENSMUST00000176792 3500 ntBASIC7.2□□□□□ -1.26
Ddx56Q9D0R4 Gm31049-201ENSMUST00000201516 1302 ntBASIC7.2□□□□□ -1.26
Ddx56Q9D0R4 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ddx56Q9D0R4 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ddx56Q9D0R4 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Ddx56Q9D0R4 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Ddx56Q9D0R4 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ddx56Q9D0R4 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ddx56Q9D0R4 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC7.2□□□□□ -1.26
Ddx56Q9D0R4 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Ddx56Q9D0R4 Gm37772-201ENSMUST00000191635 1394 ntBASIC7.2□□□□□ -1.26
Ddx56Q9D0R4 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Ddx56Q9D0R4 Gm43876-201ENSMUST00000203831 3229 ntBASIC7.2□□□□□ -1.26
Ddx56Q9D0R4 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Ddx56Q9D0R4 Gm43953-201ENSMUST00000203709 2867 ntBASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 AC135119.1-204ENSMUST00000228036 2663 ntBASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 AC165260.6-206ENSMUST00000223884 3698 ntBASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Mir466i-201ENSMUST00000116924 121 ntBASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Gm14904-201ENSMUST00000117067 335 ntBASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Gm14865-201ENSMUST00000117523 494 ntBASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Gm10241-201ENSMUST00000117664 286 ntBASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Gm12757-201ENSMUST00000119465 800 ntBASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Gm27001-201ENSMUST00000182252 936 ntBASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Gm28114-201ENSMUST00000187232 379 ntBASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Gm37241-201ENSMUST00000191736 523 ntBASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Gm37383-201ENSMUST00000191750 745 ntBASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Ighv8-1-201ENSMUST00000194897 291 ntBASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Gm6590-201ENSMUST00000203343 687 ntBASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Gm44705-201ENSMUST00000206719 339 ntBASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Gm18907-201ENSMUST00000209719 932 ntBASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Gm3678-201ENSMUST00000218888 492 ntBASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 AC102139.1-201ENSMUST00000227000 251 ntBASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 n-R5s97-201ENSMUST00000082585 113 ntBASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Gm25810-201ENSMUST00000082752 108 ntBASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Mir412-201ENSMUST00000083636 80 ntBASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Gm10780-201ENSMUST00000099459 285 ntBASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Gm43606-201ENSMUST00000195938 3556 ntBASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Gm44723-201ENSMUST00000207369 4000 ntBASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Gm38026-201ENSMUST00000193284 3880 ntBASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Ddx56Q9D0R4 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Ddx56Q9D0R4 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms