Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC8.17□□□□□ -1.1
Trim11Q99PQ2 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Gm42577-201ENSMUST00000201367 3211 ntBASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Gm38070-201ENSMUST00000191850 6480 ntBASIC8.17□□□□□ -1.1
Trim11Q99PQ2 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Trim11Q99PQ2 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim11Q99PQ2 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim11Q99PQ2 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Igkv8-30-201ENSMUST00000103378 368 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Gm6490-201ENSMUST00000111862 461 ntBASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Gm15203-201ENSMUST00000117668 455 ntBASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Gm14248-201ENSMUST00000117790 544 ntBASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Gm37530-201ENSMUST00000191759 4932 ntBASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Gm7341-201ENSMUST00000192183 926 ntBASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Gm43581-201ENSMUST00000196766 2864 ntBASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Igkv12-49-201ENSMUST00000197714 278 ntBASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Gm43344-201ENSMUST00000198723 1229 ntBASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Gm44943-201ENSMUST00000207254 300 ntBASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 AC162467.1-201ENSMUST00000220254 621 ntBASIC8.16□□□□□ -1.1
Trim11Q99PQ2 RMST_1.1-213ENSMUST00000220288 792 ntTSL 5 BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Gm32300-201ENSMUST00000221735 515 ntBASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Lipt1-201ENSMUST00000041621 1485 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Gm38218-201ENSMUST00000193555 4689 ntBASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Gm38120-201ENSMUST00000195506 4642 ntBASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trim11Q99PQ2 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim11Q99PQ2 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim11Q99PQ2 CT573019.1-201ENSMUST00000227762 1689 ntBASIC8.15□□□□□ -1.1
Trim11Q99PQ2 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim11Q99PQ2 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim11Q99PQ2 Gm37303-201ENSMUST00000194202 1559 ntBASIC8.15□□□□□ -1.1
Trim11Q99PQ2 Gm11282-201ENSMUST00000119018 1416 ntBASIC8.15□□□□□ -1.1
Trim11Q99PQ2 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim11Q99PQ2 Gm1587-201ENSMUST00000100372 372 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim11Q99PQ2 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
Trim11Q99PQ2 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim11Q99PQ2 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim11Q99PQ2 Gm15385-201ENSMUST00000118725 667 ntBASIC8.15□□□□□ -1.1
Trim11Q99PQ2 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
Trim11Q99PQ2 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim11Q99PQ2 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim11Q99PQ2 Gm16277-201ENSMUST00000143595 662 ntTSL 3 BASIC8.15□□□□□ -1.1
Trim11Q99PQ2 Gm24768-201ENSMUST00000158512 94 ntBASIC8.15□□□□□ -1.1
Trim11Q99PQ2 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC8.15□□□□□ -1.1
Trim11Q99PQ2 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC8.15□□□□□ -1.1
Trim11Q99PQ2 Mir3072-201ENSMUST00000175610 83 ntBASIC8.15□□□□□ -1.1
Trim11Q99PQ2 Hist2h2bb-201ENSMUST00000177113 381 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Trim11Q99PQ2 Gm8357-201ENSMUST00000181115 1011 ntBASIC8.15□□□□□ -1.1
Trim11Q99PQ2 Gm20257-201ENSMUST00000185352 936 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 101.8 ms