Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm44624-201ENSMUST00000208700 2278 ntBASIC6.46□□□□□ -1.37
Msh4Q99MT2 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Msh4Q99MT2 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Msh4Q99MT2 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC6.46□□□□□ -1.38
Msh4Q99MT2 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Msh4Q99MT2 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Msh4Q99MT2 Gm13141-201ENSMUST00000117417 456 ntBASIC6.46□□□□□ -1.38
Msh4Q99MT2 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Msh4Q99MT2 Gm11833-201ENSMUST00000118393 853 ntBASIC6.46□□□□□ -1.38
Msh4Q99MT2 Gm15129-201ENSMUST00000119673 279 ntBASIC6.46□□□□□ -1.38
Msh4Q99MT2 Gm5166-201ENSMUST00000121332 573 ntBASIC6.46□□□□□ -1.38
Msh4Q99MT2 Gm14212-201ENSMUST00000122023 826 ntBASIC6.46□□□□□ -1.38
Msh4Q99MT2 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC6.46□□□□□ -1.38
Msh4Q99MT2 Gm10364-202ENSMUST00000153034 1001 ntBASIC6.46□□□□□ -1.38
Msh4Q99MT2 Gm23229-201ENSMUST00000157297 105 ntBASIC6.46□□□□□ -1.38
Msh4Q99MT2 Gm8582-201ENSMUST00000164061 789 ntBASIC6.46□□□□□ -1.38
Msh4Q99MT2 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Msh4Q99MT2 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Msh4Q99MT2 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Msh4Q99MT2 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Msh4Q99MT2 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Msh4Q99MT2 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Msh4Q99MT2 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Msh4Q99MT2 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Msh4Q99MT2 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Msh4Q99MT2 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Msh4Q99MT2 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Msh4Q99MT2 Gm21728-201ENSMUST00000188442 695 ntBASIC6.46□□□□□ -1.38
Msh4Q99MT2 Gm21889-201ENSMUST00000188487 695 ntBASIC6.46□□□□□ -1.38
Msh4Q99MT2 Gm20932-201ENSMUST00000189115 694 ntBASIC6.46□□□□□ -1.38
Msh4Q99MT2 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
Msh4Q99MT2 Gm21920-201ENSMUST00000190042 695 ntBASIC6.46□□□□□ -1.38
Msh4Q99MT2 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Msh4Q99MT2 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Msh4Q99MT2 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Msh4Q99MT2 Gm3841-201ENSMUST00000191399 451 ntBASIC6.46□□□□□ -1.38
Msh4Q99MT2 Gm37152-201ENSMUST00000193369 1175 ntBASIC6.46□□□□□ -1.38
Msh4Q99MT2 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC6.46□□□□□ -1.38
Msh4Q99MT2 Gm19185-201ENSMUST00000196365 643 ntBASIC6.46□□□□□ -1.38
Msh4Q99MT2 Gm5050-201ENSMUST00000197164 775 ntBASIC6.46□□□□□ -1.38
Msh4Q99MT2 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Msh4Q99MT2 Gm5711-201ENSMUST00000197896 421 ntBASIC6.46□□□□□ -1.38
Msh4Q99MT2 AC151967.1-201ENSMUST00000198146 76 ntBASIC6.46□□□□□ -1.38
Msh4Q99MT2 Gm43789-201ENSMUST00000199275 2472 ntBASIC6.46□□□□□ -1.38
Msh4Q99MT2 Gm19596-201ENSMUST00000203685 739 ntBASIC6.46□□□□□ -1.38
Msh4Q99MT2 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC6.46□□□□□ -1.38
Msh4Q99MT2 Gm44111-201ENSMUST00000204649 399 ntBASIC6.46□□□□□ -1.38
Msh4Q99MT2 Gm44856-201ENSMUST00000206639 304 ntBASIC6.46□□□□□ -1.38
Msh4Q99MT2 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Msh4Q99MT2 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Msh4Q99MT2 Gm4803-201ENSMUST00000218729 1279 ntBASIC6.46□□□□□ -1.38
Msh4Q99MT2 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC6.46□□□□□ -1.38
Msh4Q99MT2 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Msh4Q99MT2 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Msh4Q99MT2 Gm7731-201ENSMUST00000091759 470 ntBASIC6.46□□□□□ -1.38
Msh4Q99MT2 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Msh4Q99MT2 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC6.46□□□□□ -1.38
Msh4Q99MT2 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Msh4Q99MT2 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC6.46□□□□□ -1.38
Msh4Q99MT2 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Msh4Q99MT2 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Msh4Q99MT2 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Msh4Q99MT2 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Msh4Q99MT2 AC154642.2-201ENSMUST00000223657 2485 ntBASIC6.45□□□□□ -1.38
Msh4Q99MT2 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Msh4Q99MT2 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC6.45□□□□□ -1.38
Msh4Q99MT2 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.45□□□□□ -1.38
Msh4Q99MT2 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Msh4Q99MT2 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
Msh4Q99MT2 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Msh4Q99MT2 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC6.45□□□□□ -1.38
Msh4Q99MT2 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC6.45□□□□□ -1.38
Msh4Q99MT2 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Msh4Q99MT2 Gm43483-201ENSMUST00000196724 2860 ntBASIC6.45□□□□□ -1.38
Msh4Q99MT2 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Msh4Q99MT2 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Msh4Q99MT2 Gm38077-201ENSMUST00000193657 3245 ntBASIC6.45□□□□□ -1.38
Msh4Q99MT2 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Msh4Q99MT2 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
Msh4Q99MT2 Gm10555-201ENSMUST00000193178 1791 ntBASIC6.45□□□□□ -1.38
Msh4Q99MT2 Gm22231-201ENSMUST00000101027 73 ntBASIC6.45□□□□□ -1.38
Msh4Q99MT2 Gm12804-201ENSMUST00000121030 999 ntBASIC6.45□□□□□ -1.38
Msh4Q99MT2 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Msh4Q99MT2 Gm4886-201ENSMUST00000121874 1176 ntBASIC6.45□□□□□ -1.38
Msh4Q99MT2 Gm12778-201ENSMUST00000122341 333 ntBASIC6.45□□□□□ -1.38
Msh4Q99MT2 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Msh4Q99MT2 Gm3650-201ENSMUST00000180600 747 ntBASIC6.45□□□□□ -1.38
Msh4Q99MT2 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Msh4Q99MT2 Gm29197-201ENSMUST00000185922 702 ntBASIC6.45□□□□□ -1.38
Msh4Q99MT2 Gm9127-201ENSMUST00000188041 985 ntBASIC6.45□□□□□ -1.38
Msh4Q99MT2 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC6.45□□□□□ -1.38
Msh4Q99MT2 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC6.45□□□□□ -1.38
Msh4Q99MT2 Gm29605-201ENSMUST00000190800 292 ntBASIC6.45□□□□□ -1.38
Msh4Q99MT2 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC6.45□□□□□ -1.38
Msh4Q99MT2 Gm43063-201ENSMUST00000198198 1081 ntBASIC6.45□□□□□ -1.38
Msh4Q99MT2 Gm44279-201ENSMUST00000205154 472 ntBASIC6.45□□□□□ -1.38
Msh4Q99MT2 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Msh4Q99MT2 Gm44849-201ENSMUST00000207595 484 ntBASIC6.45□□□□□ -1.38
Msh4Q99MT2 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Msh4Q99MT2 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC6.45□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms