Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm378-201ENSMUST00000120797 820 ntBASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Gm13188-201ENSMUST00000121150 564 ntBASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 4930455G09Rik-201ENSMUST00000126231 630 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Gm25559-201ENSMUST00000157182 74 ntBASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Gm17069-201ENSMUST00000172256 490 ntBASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Gm3591-202ENSMUST00000179312 396 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Gm25284-201ENSMUST00000180345 141 ntBASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Gm5696-201ENSMUST00000189850 552 ntBASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Gm37977-201ENSMUST00000193096 721 ntBASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Gm43568-202ENSMUST00000198427 476 ntTSL 3 BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Gm42767-201ENSMUST00000198583 632 ntBASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 D830044I16Rik-203ENSMUST00000205437 1016 ntAPPRIS P5 TSL 5 BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 AC167140.1-201ENSMUST00000224710 403 ntBASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 AC192434.1-201ENSMUST00000225464 390 ntBASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 AC122309.1-201ENSMUST00000226945 421 ntBASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 AC117202.1-201ENSMUST00000227007 445 ntBASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 AC168062.2-201ENSMUST00000228907 422 ntBASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Glycam1-201ENSMUST00000023134 628 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Olfr51-201ENSMUST00000076514 924 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 AC107232.1-201ENSMUST00000227785 1503 ntBASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Homer1-201ENSMUST00000060490 2765 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 4930546K05Rik-202ENSMUST00000216586 3539 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Gm37786-201ENSMUST00000191714 3225 ntBASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Fignl1-201ENSMUST00000047689 2961 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Zkscan8-201ENSMUST00000045228 8805 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Trps1-205ENSMUST00000183997 3627 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Ctnnd1-208ENSMUST00000111677 5789 ntTSL 5 BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Mbtps1-202ENSMUST00000098362 4336 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Rapgef6-210ENSMUST00000207429 5164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 AC164625.1-201ENSMUST00000214034 3036 ntBASIC8.11□□□□□ -1.11
Pcdhb3Q91XZ7 Adam5-202ENSMUST00000118419 2791 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Lemd1-205ENSMUST00000188169 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Ermard-204ENSMUST00000097395 1593 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Ryr2-202ENSMUST00000170156 16813 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Ryr2-201ENSMUST00000021750 16814 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Dnttip2-201ENSMUST00000035776 2429 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Slc17a1-202ENSMUST00000110413 1965 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Ighv1-9-201ENSMUST00000103498 348 ntAPPRIS ALT2 BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm25613-201ENSMUST00000104012 129 ntBASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 S100a16-204ENSMUST00000107333 608 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Inca1-204ENSMUST00000108543 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Mir467h-201ENSMUST00000116759 121 ntBASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm26156-201ENSMUST00000116999 123 ntBASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm11443-201ENSMUST00000118790 479 ntBASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm9378-201ENSMUST00000120315 471 ntBASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm11295-201ENSMUST00000121379 803 ntBASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm8722-201ENSMUST00000121466 769 ntBASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm12499-201ENSMUST00000121961 546 ntBASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm14530-201ENSMUST00000122391 333 ntBASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Apoc2-202ENSMUST00000134116 569 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm22733-201ENSMUST00000158094 91 ntBASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm24050-201ENSMUST00000158623 290 ntBASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm23024-201ENSMUST00000158770 292 ntBASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm20447-201ENSMUST00000173290 599 ntBASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm8696-201ENSMUST00000174777 385 ntBASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Sdhd-201ENSMUST00000000175 1231 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm933-201ENSMUST00000179384 679 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm6919-201ENSMUST00000180049 483 ntBASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm26612-201ENSMUST00000180785 1055 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Mir7659-201ENSMUST00000184079 58 ntBASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm28645-201ENSMUST00000185859 564 ntBASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 1700019D03Rik-204ENSMUST00000186266 623 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm37996-201ENSMUST00000191859 367 ntBASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 2610105M22Rik-201ENSMUST00000193707 1153 ntBASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm38289-201ENSMUST00000194273 597 ntTSL 5 BASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Ighv1-10-201ENSMUST00000194372 355 ntBASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm42441-201ENSMUST00000199778 748 ntBASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Olfr326-ps1-201ENSMUST00000204790 392 ntBASIC8.1□□□□□ -1.11
Pcdhb3Q91XZ7 Gm45689-201ENSMUST00000210522 133 ntBASIC8.1□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms