Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 Gm10555-201ENSMUST00000193178 1791 ntBASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 Gm37621-201ENSMUST00000194716 5531 ntBASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 Gm42597-201ENSMUST00000196663 1544 ntBASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 Gm11796-201ENSMUST00000120208 972 ntBASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 Gm12804-201ENSMUST00000121030 999 ntBASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 Gm5843-201ENSMUST00000121631 476 ntBASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 Gm26023-201ENSMUST00000122722 313 ntBASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 Gm26381-201ENSMUST00000174895 92 ntBASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 Gm27970-201ENSMUST00000184854 407 ntBASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 Gm29784-201ENSMUST00000196217 406 ntBASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 Gm7439-201ENSMUST00000214053 835 ntBASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 n-R5s56-201ENSMUST00000082521 105 ntBASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 Mir7b-201ENSMUST00000083557 111 ntBASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 Gm29486-201ENSMUST00000088648 372 ntBASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 Gm38082-201ENSMUST00000192800 6882 ntBASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Sf3a1Q8K4Z5 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Gm14733-201ENSMUST00000117680 133 ntBASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Gm13121-201ENSMUST00000120637 632 ntBASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Gm12630-201ENSMUST00000121575 784 ntBASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Gm5809-201ENSMUST00000121854 529 ntBASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Gm14212-201ENSMUST00000122023 826 ntBASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Gm13487-201ENSMUST00000122240 864 ntBASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Gm22636-201ENSMUST00000158142 275 ntBASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Gm2229-201ENSMUST00000193328 710 ntBASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Ighv1-29-201ENSMUST00000194116 342 ntBASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Gm45626-201ENSMUST00000210093 361 ntBASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 AC108846.4-201ENSMUST00000216783 341 ntBASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Gm18586-201ENSMUST00000217265 518 ntBASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 AV026068-218ENSMUST00000223980 575 ntBASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 AC107663.1-201ENSMUST00000224257 468 ntBASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 AC122533.1-201ENSMUST00000225177 767 ntBASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 AC114008.1-201ENSMUST00000226193 937 ntBASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 AC172989.1-201ENSMUST00000226387 513 ntBASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 AC123665.3-201ENSMUST00000228735 1216 ntBASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Glycam1-204ENSMUST00000228895 641 ntBASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 CT009757.4-201ENSMUST00000221520 2541 ntBASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Gm43187-201ENSMUST00000200652 2397 ntBASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Gm8700-201ENSMUST00000222187 3054 ntBASIC8.04□□□□□ -1.12
Sf3a1Q8K4Z5 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms