Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm24473-201ENSMUST00000104483 131 ntBASIC7.69□□□□□ -1.18
Nup88Q8CEC0 Gm12101-201ENSMUST00000121590 390 ntBASIC7.69□□□□□ -1.18
Nup88Q8CEC0 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC7.69□□□□□ -1.18
Nup88Q8CEC0 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Nup88Q8CEC0 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Nup88Q8CEC0 Gm27295-201ENSMUST00000184264 153 ntBASIC7.69□□□□□ -1.18
Nup88Q8CEC0 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Nup88Q8CEC0 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC7.69□□□□□ -1.18
Nup88Q8CEC0 Gm44712-201ENSMUST00000206250 1076 ntBASIC7.69□□□□□ -1.18
Nup88Q8CEC0 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC7.69□□□□□ -1.18
Nup88Q8CEC0 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Nup88Q8CEC0 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Nup88Q8CEC0 AC131654.1-201ENSMUST00000219675 745 ntBASIC7.69□□□□□ -1.18
Nup88Q8CEC0 Gm2139-201ENSMUST00000222569 1075 ntBASIC7.69□□□□□ -1.18
Nup88Q8CEC0 AC125064.1-201ENSMUST00000225801 295 ntBASIC7.69□□□□□ -1.18
Nup88Q8CEC0 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC7.69□□□□□ -1.18
Nup88Q8CEC0 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Nup88Q8CEC0 Gm5341-201ENSMUST00000058881 489 ntBASIC7.69□□□□□ -1.18
Nup88Q8CEC0 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
Nup88Q8CEC0 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Nup88Q8CEC0 Gm43335-201ENSMUST00000198299 3276 ntBASIC7.69□□□□□ -1.18
Nup88Q8CEC0 Gm44046-201ENSMUST00000203145 2678 ntBASIC7.69□□□□□ -1.18
Nup88Q8CEC0 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC7.69□□□□□ -1.18
Nup88Q8CEC0 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Nup88Q8CEC0 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC7.69□□□□□ -1.18
Nup88Q8CEC0 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Nup88Q8CEC0 Gm38178-201ENSMUST00000194502 2471 ntBASIC7.69□□□□□ -1.18
Nup88Q8CEC0 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Nup88Q8CEC0 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Nup88Q8CEC0 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC7.69□□□□□ -1.18
Nup88Q8CEC0 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC7.69□□□□□ -1.18
Nup88Q8CEC0 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC7.68□□□□□ -1.18
Nup88Q8CEC0 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Nup88Q8CEC0 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Nup88Q8CEC0 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Nup88Q8CEC0 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Nup88Q8CEC0 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Nup88Q8CEC0 Gm44194-201ENSMUST00000204222 3229 ntBASIC7.68□□□□□ -1.18
Nup88Q8CEC0 AC120347.1-201ENSMUST00000223326 1639 ntBASIC7.68□□□□□ -1.18
Nup88Q8CEC0 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Nup88Q8CEC0 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Nup88Q8CEC0 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Nup88Q8CEC0 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
Nup88Q8CEC0 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Nup88Q8CEC0 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Nup88Q8CEC0 Gm15696-201ENSMUST00000121730 445 ntBASIC7.68□□□□□ -1.18
Nup88Q8CEC0 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Nup88Q8CEC0 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Nup88Q8CEC0 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Nup88Q8CEC0 Gm22428-201ENSMUST00000158554 132 ntBASIC7.68□□□□□ -1.18
Nup88Q8CEC0 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Nup88Q8CEC0 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Nup88Q8CEC0 Gm2229-201ENSMUST00000193328 710 ntBASIC7.68□□□□□ -1.18
Nup88Q8CEC0 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC7.68□□□□□ -1.18
Nup88Q8CEC0 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Nup88Q8CEC0 AC154461.5-201ENSMUST00000225429 774 ntBASIC7.68□□□□□ -1.18
Nup88Q8CEC0 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Nup88Q8CEC0 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Nup88Q8CEC0 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Nup88Q8CEC0 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Nup88Q8CEC0 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Nup88Q8CEC0 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Nup88Q8CEC0 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Nup88Q8CEC0 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC7.68□□□□□ -1.18
Nup88Q8CEC0 Gm19210-201ENSMUST00000199562 1350 ntBASIC7.68□□□□□ -1.18
Nup88Q8CEC0 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
Nup88Q8CEC0 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC7.68□□□□□ -1.18
Nup88Q8CEC0 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
Nup88Q8CEC0 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Nup88Q8CEC0 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC7.68□□□□□ -1.18
Nup88Q8CEC0 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Nup88Q8CEC0 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Nup88Q8CEC0 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Nek7-203ENSMUST00000187407 4336 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Nup88Q8CEC0 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Gm24790-201ENSMUST00000104285 132 ntBASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Gm14755-201ENSMUST00000118037 384 ntBASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Gm14613-201ENSMUST00000122239 752 ntBASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Gm21392-201ENSMUST00000182950 972 ntBASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Gm412-201ENSMUST00000193360 948 ntBASIC7.67□□□□□ -1.18
Nup88Q8CEC0 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Ighv1-14-201ENSMUST00000194015 402 ntBASIC7.67□□□□□ -1.18
Nup88Q8CEC0 Gm29784-201ENSMUST00000196217 406 ntBASIC7.67□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms