Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Usp40Q8BWR4 CT025535.2-201ENSMUST00000228572 7441 ntBASIC9.04□□□□□ -0.96
Usp40Q8BWR4 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Usp40Q8BWR4 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Usp40Q8BWR4 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Usp40Q8BWR4 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Usp40Q8BWR4 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Usp40Q8BWR4 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Usp40Q8BWR4 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Usp40Q8BWR4 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC9.03□□□□□ -0.96
Usp40Q8BWR4 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Usp40Q8BWR4 Kcna2-203ENSMUST00000197470 4370 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Usp40Q8BWR4 Tbx20-201ENSMUST00000052946 9091 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Usp40Q8BWR4 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Usp40Q8BWR4 Patj-204ENSMUST00000107029 4342 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Usp40Q8BWR4 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Usp40Q8BWR4 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC9.03□□□□□ -0.96
Usp40Q8BWR4 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Usp40Q8BWR4 AC165260.6-204ENSMUST00000225571 3508 ntBASIC9.03□□□□□ -0.96
Usp40Q8BWR4 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Usp40Q8BWR4 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC9.03□□□□□ -0.96
Usp40Q8BWR4 Gm11821-201ENSMUST00000117335 979 ntBASIC9.03□□□□□ -0.96
Usp40Q8BWR4 Gm14550-201ENSMUST00000117918 407 ntBASIC9.03□□□□□ -0.96
Usp40Q8BWR4 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC9.03□□□□□ -0.96
Usp40Q8BWR4 Gm14938-201ENSMUST00000119482 943 ntBASIC9.03□□□□□ -0.96
Usp40Q8BWR4 Gm12518-201ENSMUST00000122075 779 ntBASIC9.03□□□□□ -0.96
Usp40Q8BWR4 Gm26023-201ENSMUST00000122722 313 ntBASIC9.03□□□□□ -0.96
Usp40Q8BWR4 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC9.03□□□□□ -0.96
Usp40Q8BWR4 Gm26410-201ENSMUST00000157670 261 ntBASIC9.03□□□□□ -0.96
Usp40Q8BWR4 Gm23343-201ENSMUST00000158964 143 ntBASIC9.03□□□□□ -0.96
Usp40Q8BWR4 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Usp40Q8BWR4 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Usp40Q8BWR4 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC9.03□□□□□ -0.96
Usp40Q8BWR4 Gm22548-201ENSMUST00000174899 78 ntBASIC9.03□□□□□ -0.96
Usp40Q8BWR4 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC9.03□□□□□ -0.96
Usp40Q8BWR4 Gm27970-201ENSMUST00000184854 407 ntBASIC9.03□□□□□ -0.96
Usp40Q8BWR4 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Usp40Q8BWR4 Gm43160-201ENSMUST00000196453 421 ntBASIC9.03□□□□□ -0.96
Usp40Q8BWR4 Gm3321-201ENSMUST00000200603 1129 ntBASIC9.03□□□□□ -0.96
Usp40Q8BWR4 Gm44061-201ENSMUST00000203962 1195 ntBASIC9.03□□□□□ -0.96
Usp40Q8BWR4 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC9.03□□□□□ -0.96
Usp40Q8BWR4 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
Usp40Q8BWR4 Gm45485-201ENSMUST00000211229 357 ntBASIC9.03□□□□□ -0.96
Usp40Q8BWR4 AC135353.1-201ENSMUST00000215330 630 ntBASIC9.03□□□□□ -0.96
Usp40Q8BWR4 AC132384.6-201ENSMUST00000218976 1206 ntBASIC9.03□□□□□ -0.96
Usp40Q8BWR4 AC122290.1-201ENSMUST00000225631 1078 ntBASIC9.03□□□□□ -0.96
Usp40Q8BWR4 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Usp40Q8BWR4 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Usp40Q8BWR4 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Usp40Q8BWR4 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC9.03□□□□□ -0.96
Usp40Q8BWR4 CT025566.1-202ENSMUST00000224800 2511 ntBASIC9.03□□□□□ -0.96
Usp40Q8BWR4 Gm38366-201ENSMUST00000193127 1934 ntBASIC9.03□□□□□ -0.96
Usp40Q8BWR4 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC9.03□□□□□ -0.96
Usp40Q8BWR4 Gm42490-201ENSMUST00000198595 2064 ntBASIC9.03□□□□□ -0.96
Usp40Q8BWR4 Gm43216-201ENSMUST00000196295 1333 ntBASIC9.03□□□□□ -0.96
Usp40Q8BWR4 Prex2-201ENSMUST00000027056 11053 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Usp40Q8BWR4 Gm21036-201ENSMUST00000207544 2611 ntBASIC9.02□□□□□ -0.96
Usp40Q8BWR4 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC9.02□□□□□ -0.96
Usp40Q8BWR4 Olfr825-203ENSMUST00000216530 3502 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.96
Usp40Q8BWR4 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.96
Usp40Q8BWR4 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Usp40Q8BWR4 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Usp40Q8BWR4 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.96
Usp40Q8BWR4 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC9.02□□□□□ -0.97
Usp40Q8BWR4 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Usp40Q8BWR4 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Usp40Q8BWR4 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC9.02□□□□□ -0.97
Usp40Q8BWR4 Gm36814-201ENSMUST00000197457 1755 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Usp40Q8BWR4 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Usp40Q8BWR4 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Usp40Q8BWR4 Mir708-201ENSMUST00000102189 109 ntBASIC9.02□□□□□ -0.97
Usp40Q8BWR4 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Usp40Q8BWR4 Gm12890-201ENSMUST00000120885 373 ntBASIC9.02□□□□□ -0.97
Usp40Q8BWR4 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC9.02□□□□□ -0.97
Usp40Q8BWR4 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Usp40Q8BWR4 Gm27512-201ENSMUST00000175328 126 ntBASIC9.02□□□□□ -0.97
Usp40Q8BWR4 Gm13147-202ENSMUST00000177526 1173 ntBASIC9.02□□□□□ -0.97
Usp40Q8BWR4 Gm9529-201ENSMUST00000177598 579 ntBASIC9.02□□□□□ -0.97
Usp40Q8BWR4 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC9.02□□□□□ -0.97
Usp40Q8BWR4 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Usp40Q8BWR4 Gm9931-201ENSMUST00000193584 1185 ntBASIC9.02□□□□□ -0.97
Usp40Q8BWR4 Gm20926-201ENSMUST00000194457 696 ntBASIC9.02□□□□□ -0.97
Usp40Q8BWR4 Gm43354-201ENSMUST00000196862 346 ntBASIC9.02□□□□□ -0.97
Usp40Q8BWR4 Gm17824-201ENSMUST00000197690 805 ntBASIC9.02□□□□□ -0.97
Usp40Q8BWR4 Gm44091-201ENSMUST00000205212 649 ntBASIC9.02□□□□□ -0.97
Usp40Q8BWR4 Gm44809-201ENSMUST00000208305 993 ntBASIC9.02□□□□□ -0.97
Usp40Q8BWR4 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC9.02□□□□□ -0.97
Usp40Q8BWR4 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Usp40Q8BWR4 Gm3266-201ENSMUST00000217832 591 ntBASIC9.02□□□□□ -0.97
Usp40Q8BWR4 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC9.02□□□□□ -0.97
Usp40Q8BWR4 Gm5514-201ENSMUST00000060477 306 ntBASIC9.02□□□□□ -0.97
Usp40Q8BWR4 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC9.02□□□□□ -0.97
Usp40Q8BWR4 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Usp40Q8BWR4 Chd8-201ENSMUST00000089752 8190 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Usp40Q8BWR4 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Usp40Q8BWR4 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Usp40Q8BWR4 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Usp40Q8BWR4 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Usp40Q8BWR4 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Usp40Q8BWR4 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 284.9 ms