Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Gm24756-201ENSMUST00000177002 96 ntBASIC5.24□□□□□ -1.57
Smco3Q8BQM7 Hist2h2bb-201ENSMUST00000177113 381 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Smco3Q8BQM7 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
Smco3Q8BQM7 Gm28546-201ENSMUST00000188221 615 ntBASIC5.24□□□□□ -1.57
Smco3Q8BQM7 Gm29160-201ENSMUST00000190094 699 ntBASIC5.24□□□□□ -1.57
Smco3Q8BQM7 Gm2860-201ENSMUST00000199226 707 ntBASIC5.24□□□□□ -1.57
Smco3Q8BQM7 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Smco3Q8BQM7 Gm44044-201ENSMUST00000205178 1089 ntBASIC5.24□□□□□ -1.57
Smco3Q8BQM7 Gm44770-201ENSMUST00000205395 1264 ntBASIC5.24□□□□□ -1.57
Smco3Q8BQM7 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Smco3Q8BQM7 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC5.24□□□□□ -1.57
Smco3Q8BQM7 AC127242.3-201ENSMUST00000222009 580 ntBASIC5.24□□□□□ -1.57
Smco3Q8BQM7 AC165157.1-201ENSMUST00000222981 580 ntBASIC5.24□□□□□ -1.57
Smco3Q8BQM7 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.24□□□□□ -1.57
Smco3Q8BQM7 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Smco3Q8BQM7 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
Smco3Q8BQM7 n-R5s29-201ENSMUST00000082836 119 ntBASIC5.24□□□□□ -1.57
Smco3Q8BQM7 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC5.24□□□□□ -1.57
Smco3Q8BQM7 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Smco3Q8BQM7 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Smco3Q8BQM7 AC155167.2-201ENSMUST00000226127 1945 ntBASIC5.24□□□□□ -1.57
Smco3Q8BQM7 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Smco3Q8BQM7 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC5.24□□□□□ -1.57
Smco3Q8BQM7 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC5.24□□□□□ -1.57
Smco3Q8BQM7 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC5.24□□□□□ -1.57
Smco3Q8BQM7 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC5.24□□□□□ -1.57
Smco3Q8BQM7 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC5.24□□□□□ -1.57
Smco3Q8BQM7 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC5.24□□□□□ -1.57
Smco3Q8BQM7 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC5.24□□□□□ -1.57
Smco3Q8BQM7 Gm43410-201ENSMUST00000197510 2234 ntBASIC5.24□□□□□ -1.57
Smco3Q8BQM7 Gm37186-201ENSMUST00000195629 2861 ntBASIC5.24□□□□□ -1.57
Smco3Q8BQM7 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Smco3Q8BQM7 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Smco3Q8BQM7 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Smco3Q8BQM7 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Smco3Q8BQM7 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Smco3Q8BQM7 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Smco3Q8BQM7 Gm45311-201ENSMUST00000211086 1330 ntBASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Gm10601-201ENSMUST00000120436 1422 ntBASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Smco3Q8BQM7 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC5.23□□□□□ -1.57
Smco3Q8BQM7 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC5.23□□□□□ -1.57
Smco3Q8BQM7 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Gm25311-201ENSMUST00000104136 132 ntBASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Gm23484-201ENSMUST00000104178 131 ntBASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Gm25631-201ENSMUST00000104390 130 ntBASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Gm25725-201ENSMUST00000104528 130 ntBASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Gm15040-201ENSMUST00000118561 1241 ntBASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Gm13742-201ENSMUST00000118805 457 ntBASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Gm11295-201ENSMUST00000121379 803 ntBASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Gm14048-201ENSMUST00000121864 1268 ntBASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Smco3Q8BQM7 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Gm22235-201ENSMUST00000157085 110 ntBASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Gm25057-201ENSMUST00000157366 88 ntBASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Gm22523-201ENSMUST00000158696 100 ntBASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Gm23822-201ENSMUST00000158739 128 ntBASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Gm17047-201ENSMUST00000167709 430 ntBASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Gm23139-201ENSMUST00000179454 132 ntBASIC5.23□□□□□ -1.57
Smco3Q8BQM7 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Smco3Q8BQM7 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Smco3Q8BQM7 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Gm6472-202ENSMUST00000187973 582 ntBASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Gm37375-201ENSMUST00000193859 387 ntBASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Gm20926-201ENSMUST00000194457 696 ntBASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Gm37385-201ENSMUST00000195223 387 ntBASIC5.23□□□□□ -1.57
Smco3Q8BQM7 AF067063-202ENSMUST00000195234 885 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Gm43798-201ENSMUST00000202056 394 ntBASIC5.23□□□□□ -1.57
Smco3Q8BQM7 E230032D23Rik-202ENSMUST00000207959 451 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Smco3Q8BQM7 E230032D23Rik-203ENSMUST00000208797 856 ntBASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Gm4247-201ENSMUST00000211441 1042 ntBASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Gm7780-201ENSMUST00000214787 406 ntBASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Smco3Q8BQM7 AC129219.1-201ENSMUST00000224336 448 ntBASIC5.23□□□□□ -1.57
Smco3Q8BQM7 AC107453.3-201ENSMUST00000228205 639 ntBASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Smco3Q8BQM7 AW822073-201ENSMUST00000075305 555 ntBASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Gm21731-201ENSMUST00000079524 489 ntBASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Rpl31-ps20-201ENSMUST00000080982 378 ntBASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Smco3Q8BQM7 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC5.23□□□□□ -1.57
Smco3Q8BQM7 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms