Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Mir7037-201ENSMUST00000184414 65 ntBASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Gm29519-201ENSMUST00000186994 398 ntBASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Gm38840-201ENSMUST00000204716 843 ntBASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Gm45078-201ENSMUST00000205343 546 ntBASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Gm10297-201ENSMUST00000207136 651 ntBASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Gm7588-201ENSMUST00000216866 571 ntBASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 AC158536.1-201ENSMUST00000222510 256 ntBASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 AC113125.2-201ENSMUST00000226837 362 ntBASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Malat1-201ENSMUST00000172812 6983 ntBASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Gm37255-201ENSMUST00000193302 3060 ntBASIC7.63□□□□□ -1.19
Ddx55Q6ZPL9 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Gm44021-201ENSMUST00000203055 3516 ntBASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Gm37772-201ENSMUST00000191635 1394 ntBASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Dennd6a-203ENSMUST00000224111 2692 ntBASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Gm25332-201ENSMUST00000158038 105 ntBASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Mir5107-201ENSMUST00000175586 88 ntBASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Gm8282-201ENSMUST00000187559 483 ntBASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Gm37380-201ENSMUST00000193752 397 ntBASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Gm43354-201ENSMUST00000196862 346 ntBASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Gm44265-201ENSMUST00000203631 465 ntBASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Gm9110-201ENSMUST00000219035 617 ntBASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 AC155941.1-201ENSMUST00000220223 529 ntBASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Gm34165-201ENSMUST00000222012 1174 ntBASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Gm19195-201ENSMUST00000222018 511 ntBASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 AC152394.1-201ENSMUST00000227360 1086 ntBASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx55Q6ZPL9 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ddx55Q6ZPL9 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ddx55Q6ZPL9 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ddx55Q6ZPL9 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC7.61□□□□□ -1.19
Ddx55Q6ZPL9 Actr6-201ENSMUST00000020109 1705 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ddx55Q6ZPL9 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ddx55Q6ZPL9 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Ddx55Q6ZPL9 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ddx55Q6ZPL9 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ddx55Q6ZPL9 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ddx55Q6ZPL9 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC7.61□□□□□ -1.19
Ddx55Q6ZPL9 Galnt5-201ENSMUST00000112616 4225 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ddx55Q6ZPL9 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC7.61□□□□□ -1.19
Ddx55Q6ZPL9 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ddx55Q6ZPL9 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Ddx55Q6ZPL9 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC7.61□□□□□ -1.19
Ddx55Q6ZPL9 Calr-ps-201ENSMUST00000121776 485 ntBASIC7.61□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms