Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm15971-201ENSMUST00000119372 211 ntBASIC6.39□□□□□ -1.39
ClpbQ60649 Gm4886-201ENSMUST00000121874 1176 ntBASIC6.39□□□□□ -1.39
ClpbQ60649 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ClpbQ60649 Gm25395-201ENSMUST00000157343 272 ntBASIC6.39□□□□□ -1.39
ClpbQ60649 Gm7289-201ENSMUST00000168993 734 ntBASIC6.39□□□□□ -1.39
ClpbQ60649 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC6.39□□□□□ -1.39
ClpbQ60649 Gm22990-201ENSMUST00000175427 89 ntBASIC6.39□□□□□ -1.39
ClpbQ60649 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ClpbQ60649 Gm9285-201ENSMUST00000177691 697 ntBASIC6.39□□□□□ -1.39
ClpbQ60649 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC6.39□□□□□ -1.39
ClpbQ60649 Gm29197-201ENSMUST00000185922 702 ntBASIC6.39□□□□□ -1.39
ClpbQ60649 Gm29141-201ENSMUST00000190357 882 ntBASIC6.39□□□□□ -1.39
ClpbQ60649 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC6.39□□□□□ -1.39
ClpbQ60649 Gm19124-201ENSMUST00000191041 832 ntBASIC6.39□□□□□ -1.39
ClpbQ60649 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC6.39□□□□□ -1.39
ClpbQ60649 Gm37383-201ENSMUST00000191750 745 ntBASIC6.39□□□□□ -1.39
ClpbQ60649 Gm37439-201ENSMUST00000193150 856 ntBASIC6.39□□□□□ -1.39
ClpbQ60649 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
ClpbQ60649 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC6.39□□□□□ -1.39
ClpbQ60649 Gm44213-201ENSMUST00000204977 703 ntBASIC6.39□□□□□ -1.39
ClpbQ60649 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ClpbQ60649 Gm2774-201ENSMUST00000213650 1165 ntBASIC6.39□□□□□ -1.39
ClpbQ60649 Olfr923-204ENSMUST00000219798 1068 ntBASIC6.39□□□□□ -1.39
ClpbQ60649 Gm19095-201ENSMUST00000220533 730 ntBASIC6.39□□□□□ -1.39
ClpbQ60649 AC154640.1-202ENSMUST00000227828 496 ntBASIC6.39□□□□□ -1.39
ClpbQ60649 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
ClpbQ60649 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ClpbQ60649 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
ClpbQ60649 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ClpbQ60649 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ClpbQ60649 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ClpbQ60649 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ClpbQ60649 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
ClpbQ60649 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
ClpbQ60649 AC107742.1-201ENSMUST00000227769 1390 ntBASIC6.39□□□□□ -1.39
ClpbQ60649 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ClpbQ60649 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ClpbQ60649 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
ClpbQ60649 Gm37033-201ENSMUST00000193199 7350 ntBASIC6.39□□□□□ -1.39
ClpbQ60649 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ClpbQ60649 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ClpbQ60649 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.39□□□□□ -1.39
ClpbQ60649 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC6.39□□□□□ -1.39
ClpbQ60649 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
ClpbQ60649 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ClpbQ60649 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ClpbQ60649 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ClpbQ60649 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
ClpbQ60649 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
ClpbQ60649 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
ClpbQ60649 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ClpbQ60649 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ClpbQ60649 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ClpbQ60649 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ClpbQ60649 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
ClpbQ60649 AC165260.6-206ENSMUST00000223884 3698 ntBASIC6.38□□□□□ -1.39
ClpbQ60649 Mir708-201ENSMUST00000102189 109 ntBASIC6.38□□□□□ -1.39
ClpbQ60649 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
ClpbQ60649 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC6.38□□□□□ -1.39
ClpbQ60649 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
ClpbQ60649 Gm12175-201ENSMUST00000122081 345 ntBASIC6.38□□□□□ -1.39
ClpbQ60649 Gm24685-201ENSMUST00000157764 285 ntBASIC6.38□□□□□ -1.39
ClpbQ60649 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ClpbQ60649 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
ClpbQ60649 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC6.38□□□□□ -1.39
ClpbQ60649 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ClpbQ60649 Gm21301-201ENSMUST00000189476 699 ntBASIC6.38□□□□□ -1.39
ClpbQ60649 Gm28492-201ENSMUST00000190899 1019 ntBASIC6.38□□□□□ -1.39
ClpbQ60649 Gm37620-201ENSMUST00000192910 501 ntBASIC6.38□□□□□ -1.39
ClpbQ60649 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC6.38□□□□□ -1.39
ClpbQ60649 Gm37285-201ENSMUST00000194465 1139 ntBASIC6.38□□□□□ -1.39
ClpbQ60649 Gm29755-201ENSMUST00000196976 948 ntBASIC6.38□□□□□ -1.39
ClpbQ60649 Gm6649-201ENSMUST00000199743 1165 ntBASIC6.38□□□□□ -1.39
ClpbQ60649 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC6.38□□□□□ -1.39
ClpbQ60649 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC6.38□□□□□ -1.39
ClpbQ60649 AC069561.1-201ENSMUST00000213750 424 ntBASIC6.38□□□□□ -1.39
ClpbQ60649 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ClpbQ60649 Gm4042-201ENSMUST00000216946 637 ntBASIC6.38□□□□□ -1.39
ClpbQ60649 Gm18040-201ENSMUST00000217922 827 ntBASIC6.38□□□□□ -1.39
ClpbQ60649 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC6.38□□□□□ -1.39
ClpbQ60649 AC150661.1-201ENSMUST00000222563 495 ntBASIC6.38□□□□□ -1.39
ClpbQ60649 Gm2139-201ENSMUST00000222569 1075 ntBASIC6.38□□□□□ -1.39
ClpbQ60649 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC6.38□□□□□ -1.39
ClpbQ60649 Gm7252-201ENSMUST00000223284 456 ntBASIC6.38□□□□□ -1.39
ClpbQ60649 Gm19154-201ENSMUST00000223330 940 ntBASIC6.38□□□□□ -1.39
ClpbQ60649 AC138329.1-201ENSMUST00000225040 471 ntBASIC6.38□□□□□ -1.39
ClpbQ60649 CT009711.2-201ENSMUST00000225352 934 ntBASIC6.38□□□□□ -1.39
ClpbQ60649 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ClpbQ60649 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ClpbQ60649 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
ClpbQ60649 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
ClpbQ60649 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
ClpbQ60649 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ClpbQ60649 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ClpbQ60649 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
ClpbQ60649 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
ClpbQ60649 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ClpbQ60649 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ClpbQ60649 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
ClpbQ60649 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms