Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 AC107742.1-201ENSMUST00000227769 1390 ntBASIC6.95□□□□□ -1.3
Upf3bQ3ULL6 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 AC131747.2-201ENSMUST00000226121 1895 ntBASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Mir678-201ENSMUST00000102114 84 ntBASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Gm23768-201ENSMUST00000104440 131 ntBASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Gm11920-201ENSMUST00000118491 563 ntBASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Gm5793-201ENSMUST00000119393 630 ntBASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Gm14900-201ENSMUST00000120304 733 ntBASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Gm23674-201ENSMUST00000157473 131 ntBASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Gm16298-201ENSMUST00000161107 420 ntBASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Gm9529-201ENSMUST00000177598 579 ntBASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Gm28443-201ENSMUST00000189081 698 ntBASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 AC122844.1-201ENSMUST00000195971 107 ntBASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Gm5853-201ENSMUST00000197183 632 ntBASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Gm4870-201ENSMUST00000198525 1251 ntBASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Gm43098-201ENSMUST00000199989 1297 ntBASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Gm19324-201ENSMUST00000213229 1169 ntBASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Gm7780-201ENSMUST00000214787 406 ntBASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 AC158750.1-201ENSMUST00000226163 634 ntBASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 n-R5s89-201ENSMUST00000083532 104 ntBASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Olfr687-201ENSMUST00000098154 938 ntBASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC6.94□□□□□ -1.3
Upf3bQ3ULL6 AC130217.2-201ENSMUST00000224009 2990 ntBASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Gm10773-201ENSMUST00000218071 3935 ntBASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 M6pr-ps-201ENSMUST00000120481 830 ntBASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Gm14531-201ENSMUST00000120845 285 ntBASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Gm6611-201ENSMUST00000163830 1272 ntBASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Gm18833-201ENSMUST00000173218 862 ntBASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Gm8506-201ENSMUST00000186661 829 ntBASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Gm8454-201ENSMUST00000196980 811 ntBASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Gm5717-201ENSMUST00000198243 1062 ntBASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Gm46364-201ENSMUST00000218548 319 ntBASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 CT030254.1-201ENSMUST00000225450 1078 ntBASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Gm6436-201ENSMUST00000077163 451 ntBASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms