Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trim43aQ3TL54 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trim43aQ3TL54 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trim43aQ3TL54 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
Trim43aQ3TL54 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim43aQ3TL54 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trim43aQ3TL54 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Trim43aQ3TL54 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Trim43aQ3TL54 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC6.87□□□□□ -1.31
Trim43aQ3TL54 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Trim43aQ3TL54 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC6.87□□□□□ -1.31
Trim43aQ3TL54 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Trim43aQ3TL54 Gm12804-201ENSMUST00000121030 999 ntBASIC6.87□□□□□ -1.31
Trim43aQ3TL54 Gm8089-201ENSMUST00000122463 968 ntBASIC6.87□□□□□ -1.31
Trim43aQ3TL54 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC6.87□□□□□ -1.31
Trim43aQ3TL54 4930445N08Rik-201ENSMUST00000156925 313 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Trim43aQ3TL54 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC6.87□□□□□ -1.31
Trim43aQ3TL54 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Trim43aQ3TL54 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC6.87□□□□□ -1.31
Trim43aQ3TL54 Mir6348-201ENSMUST00000183804 120 ntBASIC6.87□□□□□ -1.31
Trim43aQ3TL54 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC6.87□□□□□ -1.31
Trim43aQ3TL54 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC6.87□□□□□ -1.31
Trim43aQ3TL54 Gm7343-201ENSMUST00000194510 1061 ntBASIC6.87□□□□□ -1.31
Trim43aQ3TL54 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC6.87□□□□□ -1.31
Trim43aQ3TL54 Gm43098-201ENSMUST00000199989 1297 ntBASIC6.87□□□□□ -1.31
Trim43aQ3TL54 Gm43203-201ENSMUST00000200130 558 ntBASIC6.87□□□□□ -1.31
Trim43aQ3TL54 Gm43377-201ENSMUST00000201640 455 ntBASIC6.87□□□□□ -1.31
Trim43aQ3TL54 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC6.87□□□□□ -1.31
Trim43aQ3TL54 Gm30646-201ENSMUST00000207662 180 ntBASIC6.87□□□□□ -1.31
Trim43aQ3TL54 Gm4548-201ENSMUST00000208487 509 ntBASIC6.87□□□□□ -1.31
Trim43aQ3TL54 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC6.87□□□□□ -1.31
Trim43aQ3TL54 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC6.87□□□□□ -1.31
Trim43aQ3TL54 AC153943.1-201ENSMUST00000219312 256 ntBASIC6.87□□□□□ -1.31
Trim43aQ3TL54 AC154904.1-201ENSMUST00000219510 312 ntBASIC6.87□□□□□ -1.31
Trim43aQ3TL54 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC6.87□□□□□ -1.31
Trim43aQ3TL54 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Trim43aQ3TL54 Gm6419-201ENSMUST00000097166 429 ntBASIC6.87□□□□□ -1.31
Trim43aQ3TL54 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Trim43aQ3TL54 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Trim43aQ3TL54 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Trim43aQ3TL54 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Trim43aQ3TL54 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Trim43aQ3TL54 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Trim43aQ3TL54 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Trim43aQ3TL54 AC164297.2-201ENSMUST00000224388 1508 ntBASIC6.86□□□□□ -1.31
Trim43aQ3TL54 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC6.86□□□□□ -1.31
Trim43aQ3TL54 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC6.86□□□□□ -1.31
Trim43aQ3TL54 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Trim43aQ3TL54 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Trim43aQ3TL54 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
Trim43aQ3TL54 Gm24869-201ENSMUST00000104072 128 ntBASIC6.86□□□□□ -1.31
Trim43aQ3TL54 Gm15149-201ENSMUST00000119370 360 ntBASIC6.86□□□□□ -1.31
Trim43aQ3TL54 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Trim43aQ3TL54 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC6.86□□□□□ -1.31
Trim43aQ3TL54 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC6.86□□□□□ -1.31
Trim43aQ3TL54 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Trim43aQ3TL54 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC6.86□□□□□ -1.31
Trim43aQ3TL54 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Trim43aQ3TL54 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Trim43aQ3TL54 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Trim43aQ3TL54 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Trim43aQ3TL54 Gm42799-201ENSMUST00000201331 328 ntBASIC6.86□□□□□ -1.31
Trim43aQ3TL54 Gm44243-201ENSMUST00000204323 692 ntBASIC6.86□□□□□ -1.31
Trim43aQ3TL54 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC6.86□□□□□ -1.31
Trim43aQ3TL54 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC6.86□□□□□ -1.31
Trim43aQ3TL54 Gm2975-201ENSMUST00000209710 820 ntBASIC6.86□□□□□ -1.31
Trim43aQ3TL54 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC6.86□□□□□ -1.31
Trim43aQ3TL54 Gm45899-201ENSMUST00000212196 1276 ntBASIC6.86□□□□□ -1.31
Trim43aQ3TL54 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC6.86□□□□□ -1.31
Trim43aQ3TL54 AC124184.1-201ENSMUST00000218167 283 ntBASIC6.86□□□□□ -1.31
Trim43aQ3TL54 Gm7252-201ENSMUST00000223284 456 ntBASIC6.86□□□□□ -1.31
Trim43aQ3TL54 AC165260.1-201ENSMUST00000224127 683 ntBASIC6.86□□□□□ -1.31
Trim43aQ3TL54 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Trim43aQ3TL54 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Trim43aQ3TL54 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Trim43aQ3TL54 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
Trim43aQ3TL54 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC6.86□□□□□ -1.31
Trim43aQ3TL54 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Trim43aQ3TL54 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Trim43aQ3TL54 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Trim43aQ3TL54 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Trim43aQ3TL54 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Trim43aQ3TL54 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Trim43aQ3TL54 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Trim43aQ3TL54 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Trim43aQ3TL54 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Trim43aQ3TL54 Gm12937-201ENSMUST00000118333 448 ntBASIC6.85□□□□□ -1.31
Trim43aQ3TL54 Gm13740-201ENSMUST00000120590 310 ntBASIC6.85□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 115.7 ms