Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
Col8a1Q00780 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a1Q00780 Clca3a2-201ENSMUST00000029929 3654 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a1Q00780 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a1Q00780 Eif4e2-202ENSMUST00000076362 3394 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a1Q00780 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a1Q00780 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a1Q00780 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col8a1Q00780 CT025639.1-201ENSMUST00000223906 1375 ntBASIC6.19□□□□□ -1.42
Col8a1Q00780 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col8a1Q00780 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Col8a1Q00780 Vmn2r41-201ENSMUST00000168807 3617 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Col8a1Q00780 AC123705.1-201ENSMUST00000222512 2058 ntBASIC6.19□□□□□ -1.42
Col8a1Q00780 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Col8a1Q00780 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Col8a1Q00780 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Col8a1Q00780 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Col8a1Q00780 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col8a1Q00780 1700029M20Rik-203ENSMUST00000153347 2963 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col8a1Q00780 Gm37283-201ENSMUST00000193111 1571 ntBASIC6.19□□□□□ -1.42
Col8a1Q00780 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col8a1Q00780 Ccr4-201ENSMUST00000054414 2805 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col8a1Q00780 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col8a1Q00780 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Col8a1Q00780 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC6.19□□□□□ -1.42
Col8a1Q00780 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col8a1Q00780 Dennd6a-203ENSMUST00000224111 2692 ntBASIC6.19□□□□□ -1.42
Col8a1Q00780 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col8a1Q00780 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Col8a1Q00780 Gm23748-201ENSMUST00000104227 131 ntBASIC6.19□□□□□ -1.42
Col8a1Q00780 Gm12598-201ENSMUST00000117333 830 ntBASIC6.19□□□□□ -1.42
Col8a1Q00780 Gm11407-201ENSMUST00000120362 1058 ntBASIC6.19□□□□□ -1.42
Col8a1Q00780 Gm15194-201ENSMUST00000120453 434 ntBASIC6.19□□□□□ -1.42
Col8a1Q00780 Gm16458-201ENSMUST00000121428 502 ntBASIC6.19□□□□□ -1.42
Col8a1Q00780 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC6.19□□□□□ -1.42
Col8a1Q00780 Gm26480-201ENSMUST00000122619 297 ntBASIC6.19□□□□□ -1.42
Col8a1Q00780 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC6.19□□□□□ -1.42
Col8a1Q00780 Gm13936-201ENSMUST00000130416 715 ntTSL 3 BASIC6.19□□□□□ -1.42
Col8a1Q00780 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC6.19□□□□□ -1.42
Col8a1Q00780 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col8a1Q00780 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC6.19□□□□□ -1.42
Col8a1Q00780 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col8a1Q00780 Gm22339-201ENSMUST00000157718 62 ntBASIC6.19□□□□□ -1.42
Col8a1Q00780 Gm23007-201ENSMUST00000158951 177 ntBASIC6.19□□□□□ -1.42
Col8a1Q00780 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col8a1Q00780 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC6.19□□□□□ -1.42
Col8a1Q00780 Gm8993-201ENSMUST00000182182 983 ntBASIC6.19□□□□□ -1.42
Col8a1Q00780 Gm27030-201ENSMUST00000182551 464 ntBASIC6.19□□□□□ -1.42
Col8a1Q00780 Mocs2-212ENSMUST00000184214 551 ntTSL 3 BASIC6.19□□□□□ -1.42
Col8a1Q00780 Mir7072-201ENSMUST00000184542 60 ntBASIC6.19□□□□□ -1.42
Col8a1Q00780 Arhgap26-218ENSMUST00000187912 312 ntTSL 5 BASIC6.19□□□□□ -1.42
Col8a1Q00780 Gm28113-201ENSMUST00000188280 229 ntBASIC6.19□□□□□ -1.42
Col8a1Q00780 Gm19224-201ENSMUST00000190477 793 ntBASIC6.19□□□□□ -1.42
Col8a1Q00780 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC6.19□□□□□ -1.42
Col8a1Q00780 Gm36961-201ENSMUST00000191980 132 ntBASIC6.19□□□□□ -1.42
Col8a1Q00780 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC6.19□□□□□ -1.42
Col8a1Q00780 Gm8826-201ENSMUST00000193161 948 ntBASIC6.19□□□□□ -1.42
Col8a1Q00780 Gm7166-201ENSMUST00000199715 303 ntBASIC6.19□□□□□ -1.42
Col8a1Q00780 Gm43232-201ENSMUST00000201346 364 ntBASIC6.19□□□□□ -1.42
Col8a1Q00780 Olfr1357-203ENSMUST00000205085 1012 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Col8a1Q00780 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC6.19□□□□□ -1.42
Col8a1Q00780 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Col8a1Q00780 AC116589.3-202ENSMUST00000221770 649 ntBASIC6.19□□□□□ -1.42
Col8a1Q00780 AC116589.6-201ENSMUST00000222252 649 ntBASIC6.19□□□□□ -1.42
Col8a1Q00780 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC6.19□□□□□ -1.42
Col8a1Q00780 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Col8a1Q00780 mt-Td-201ENSMUST00000082404 70 ntBASIC6.19□□□□□ -1.42
Col8a1Q00780 Gm22351-201ENSMUST00000083925 107 ntBASIC6.19□□□□□ -1.42
Col8a1Q00780 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC6.19□□□□□ -1.42
Col8a1Q00780 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC6.19□□□□□ -1.42
Col8a1Q00780 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC6.19□□□□□ -1.42
Col8a1Q00780 Casr-203ENSMUST00000172826 3659 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Col8a1Q00780 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col8a1Q00780 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col8a1Q00780 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC6.19□□□□□ -1.42
Col8a1Q00780 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col8a1Q00780 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Col8a1Q00780 Dyrk1a-201ENSMUST00000023614 5754 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Col8a1Q00780 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Col8a1Q00780 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col8a1Q00780 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col8a1Q00780 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Col8a1Q00780 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col8a1Q00780 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col8a1Q00780 AC166574.1-201ENSMUST00000226916 1309 ntBASIC6.19□□□□□ -1.42
Col8a1Q00780 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col8a1Q00780 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC6.19□□□□□ -1.42
Col8a1Q00780 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC6.19□□□□□ -1.42
Col8a1Q00780 AC153548.1-201ENSMUST00000219283 2661 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col8a1Q00780 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC6.19□□□□□ -1.42
Col8a1Q00780 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col8a1Q00780 Itgam-202ENSMUST00000106240 3325 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col8a1Q00780 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col8a1Q00780 Slco6b1-202ENSMUST00000178359 1778 ntBASIC6.18□□□□□ -1.42
Col8a1Q00780 Ranbp9-208ENSMUST00000222651 1951 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col8a1Q00780 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col8a1Q00780 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Col8a1Q00780 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col8a1Q00780 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col8a1Q00780 Musk-203ENSMUST00000098057 3422 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 157 ms