Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
PrkdcP97313 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PrkdcP97313 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PrkdcP97313 Vps8-204ENSMUST00000117598 4935 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PrkdcP97313 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PrkdcP97313 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PrkdcP97313 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
PrkdcP97313 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
PrkdcP97313 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PrkdcP97313 Gm43254-201ENSMUST00000199187 2491 ntBASIC4.29□□□□□ -1.72
PrkdcP97313 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PrkdcP97313 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PrkdcP97313 Ift172-201ENSMUST00000041565 5403 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PrkdcP97313 Gm43190-201ENSMUST00000187850 1779 ntBASIC4.29□□□□□ -1.72
PrkdcP97313 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
PrkdcP97313 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PrkdcP97313 Gm13473-201ENSMUST00000119289 367 ntBASIC4.29□□□□□ -1.72
PrkdcP97313 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PrkdcP97313 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC4.29□□□□□ -1.72
PrkdcP97313 Gm26923-201ENSMUST00000182615 996 ntBASIC4.29□□□□□ -1.72
PrkdcP97313 Gm17918-201ENSMUST00000205315 574 ntBASIC4.29□□□□□ -1.72
PrkdcP97313 CT956049.1-201ENSMUST00000225671 763 ntBASIC4.29□□□□□ -1.72
PrkdcP97313 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PrkdcP97313 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC4.29□□□□□ -1.72
PrkdcP97313 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PrkdcP97313 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PrkdcP97313 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PrkdcP97313 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PrkdcP97313 Vmn1r51-203ENSMUST00000226542 4164 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PrkdcP97313 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PrkdcP97313 Rgr-201ENSMUST00000022338 4240 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PrkdcP97313 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PrkdcP97313 Gm44620-201ENSMUST00000209183 2887 ntBASIC4.28□□□□□ -1.72
PrkdcP97313 Trmt13-201ENSMUST00000041524 3402 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PrkdcP97313 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
PrkdcP97313 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PrkdcP97313 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PrkdcP97313 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC4.28□□□□□ -1.72
PrkdcP97313 Gm11550-201ENSMUST00000118210 699 ntBASIC4.28□□□□□ -1.72
PrkdcP97313 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PrkdcP97313 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PrkdcP97313 Gm23737-201ENSMUST00000082547 159 ntBASIC4.28□□□□□ -1.72
PrkdcP97313 Gm37880-201ENSMUST00000192216 3257 ntBASIC4.28□□□□□ -1.72
PrkdcP97313 Cfap58-201ENSMUST00000066308 3345 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PrkdcP97313 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC4.28□□□□□ -1.72
PrkdcP97313 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PrkdcP97313 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC4.28□□□□□ -1.72
PrkdcP97313 Ammecr1l-201ENSMUST00000115808 4769 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PrkdcP97313 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PrkdcP97313 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC4.28□□□□□ -1.72
PrkdcP97313 Gm43581-201ENSMUST00000196766 2864 ntBASIC4.28□□□□□ -1.72
PrkdcP97313 Tpp2-207ENSMUST00000188313 4631 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PrkdcP97313 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
PrkdcP97313 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PrkdcP97313 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PrkdcP97313 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PrkdcP97313 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC4.28□□□□□ -1.72
PrkdcP97313 Gm22657-201ENSMUST00000104197 132 ntBASIC4.28□□□□□ -1.72
PrkdcP97313 Gm13679-201ENSMUST00000118678 484 ntBASIC4.28□□□□□ -1.72
PrkdcP97313 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC4.28□□□□□ -1.72
PrkdcP97313 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC4.28□□□□□ -1.72
PrkdcP97313 Gm37770-201ENSMUST00000192855 772 ntBASIC4.28□□□□□ -1.72
PrkdcP97313 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC4.28□□□□□ -1.72
PrkdcP97313 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PrkdcP97313 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PrkdcP97313 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PrkdcP97313 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PrkdcP97313 Gm37864-201ENSMUST00000195308 3075 ntBASIC4.28□□□□□ -1.72
PrkdcP97313 Zfp944-201ENSMUST00000115535 2784 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
PrkdcP97313 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PrkdcP97313 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
PrkdcP97313 Gm44045-201ENSMUST00000204906 2520 ntBASIC4.28□□□□□ -1.72
PrkdcP97313 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PrkdcP97313 Gm37959-201ENSMUST00000191700 2897 ntBASIC4.28□□□□□ -1.72
PrkdcP97313 Gm38056-201ENSMUST00000193928 5027 ntBASIC4.28□□□□□ -1.72
PrkdcP97313 Gm44503-201ENSMUST00000149692 4383 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
PrkdcP97313 G3bp1-201ENSMUST00000018727 6703 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PrkdcP97313 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC4.28□□□□□ -1.72
PrkdcP97313 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PrkdcP97313 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
PrkdcP97313 Gm12444-201ENSMUST00000121512 877 ntBASIC4.28□□□□□ -1.72
PrkdcP97313 Gm14970-201ENSMUST00000122289 355 ntBASIC4.28□□□□□ -1.72
PrkdcP97313 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC4.28□□□□□ -1.72
PrkdcP97313 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PrkdcP97313 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC4.28□□□□□ -1.72
PrkdcP97313 Gm17999-201ENSMUST00000211568 542 ntBASIC4.28□□□□□ -1.72
PrkdcP97313 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PrkdcP97313 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PrkdcP97313 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PrkdcP97313 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PrkdcP97313 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PrkdcP97313 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PrkdcP97313 Ryr1-202ENSMUST00000179893 15358 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
PrkdcP97313 Ryr1-201ENSMUST00000032813 15352 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
PrkdcP97313 AC138765.2-202ENSMUST00000228418 3435 ntBASIC4.28□□□□□ -1.72
PrkdcP97313 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PrkdcP97313 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
PrkdcP97313 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.73
PrkdcP97313 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.73
PrkdcP97313 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms