Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CiitaP79621 Mir708-201ENSMUST00000102189 109 ntBASIC7.14□□□□□ -1.27
CiitaP79621 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
CiitaP79621 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CiitaP79621 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CiitaP79621 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC7.14□□□□□ -1.27
CiitaP79621 Gm8312-201ENSMUST00000119380 618 ntBASIC7.14□□□□□ -1.27
CiitaP79621 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CiitaP79621 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC7.14□□□□□ -1.27
CiitaP79621 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CiitaP79621 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CiitaP79621 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC7.14□□□□□ -1.27
CiitaP79621 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CiitaP79621 Mir6367-201ENSMUST00000183385 102 ntBASIC7.14□□□□□ -1.27
CiitaP79621 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CiitaP79621 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CiitaP79621 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC7.14□□□□□ -1.27
CiitaP79621 Gm37423-201ENSMUST00000194246 3342 ntBASIC7.14□□□□□ -1.27
CiitaP79621 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CiitaP79621 Gm44538-201ENSMUST00000205615 348 ntBASIC7.14□□□□□ -1.27
CiitaP79621 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CiitaP79621 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CiitaP79621 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CiitaP79621 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC7.14□□□□□ -1.27
CiitaP79621 AC138284.1-201ENSMUST00000214258 3236 ntBASIC7.14□□□□□ -1.27
CiitaP79621 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
CiitaP79621 Gm4806-201ENSMUST00000222704 1690 ntBASIC7.14□□□□□ -1.27
CiitaP79621 AC116596.2-203ENSMUST00000227345 731 ntBASIC7.14□□□□□ -1.27
CiitaP79621 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CiitaP79621 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CiitaP79621 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CiitaP79621 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
CiitaP79621 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CiitaP79621 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
CiitaP79621 Gm24032-201ENSMUST00000083932 159 ntBASIC7.14□□□□□ -1.27
CiitaP79621 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC7.14□□□□□ -1.27
CiitaP79621 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CiitaP79621 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
CiitaP79621 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC7.14□□□□□ -1.27
CiitaP79621 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CiitaP79621 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CiitaP79621 Gm38120-201ENSMUST00000195506 4642 ntBASIC7.14□□□□□ -1.27
CiitaP79621 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CiitaP79621 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CiitaP79621 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
CiitaP79621 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CiitaP79621 Gm43169-201ENSMUST00000199544 4734 ntBASIC7.13□□□□□ -1.27
CiitaP79621 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CiitaP79621 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CiitaP79621 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC7.13□□□□□ -1.27
CiitaP79621 AC126549.1-201ENSMUST00000225044 3687 ntBASIC7.13□□□□□ -1.27
CiitaP79621 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC7.13□□□□□ -1.27
CiitaP79621 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
CiitaP79621 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
CiitaP79621 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CiitaP79621 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC7.13□□□□□ -1.27
CiitaP79621 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
CiitaP79621 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
CiitaP79621 Gm13207-201ENSMUST00000119862 773 ntBASIC7.13□□□□□ -1.27
CiitaP79621 Gm14300-201ENSMUST00000120800 946 ntBASIC7.13□□□□□ -1.27
CiitaP79621 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC7.13□□□□□ -1.27
CiitaP79621 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC7.13□□□□□ -1.27
CiitaP79621 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CiitaP79621 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CiitaP79621 Gm25374-201ENSMUST00000158158 101 ntBASIC7.13□□□□□ -1.27
CiitaP79621 Gm22428-201ENSMUST00000158554 132 ntBASIC7.13□□□□□ -1.27
CiitaP79621 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC7.13□□□□□ -1.27
CiitaP79621 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CiitaP79621 Gm23632-201ENSMUST00000175289 125 ntBASIC7.13□□□□□ -1.27
CiitaP79621 n-R5s109-201ENSMUST00000179195 119 ntBASIC7.13□□□□□ -1.27
CiitaP79621 Gm9274-201ENSMUST00000182505 984 ntBASIC7.13□□□□□ -1.27
CiitaP79621 Scgb2b33-201ENSMUST00000187413 334 ntBASIC7.13□□□□□ -1.27
CiitaP79621 Gm28455-201ENSMUST00000189105 1290 ntBASIC7.13□□□□□ -1.27
CiitaP79621 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC7.13□□□□□ -1.27
CiitaP79621 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC7.13□□□□□ -1.27
CiitaP79621 Gm38237-201ENSMUST00000193366 376 ntBASIC7.13□□□□□ -1.27
CiitaP79621 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC7.13□□□□□ -1.27
CiitaP79621 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC7.13□□□□□ -1.27
CiitaP79621 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC7.13□□□□□ -1.27
CiitaP79621 Gm8637-201ENSMUST00000212919 1085 ntBASIC7.13□□□□□ -1.27
CiitaP79621 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC7.13□□□□□ -1.27
CiitaP79621 AC153557.1-201ENSMUST00000217697 403 ntBASIC7.13□□□□□ -1.27
CiitaP79621 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC7.13□□□□□ -1.27
CiitaP79621 AC132260.2-201ENSMUST00000224482 344 ntBASIC7.13□□□□□ -1.27
CiitaP79621 CT025579.4-201ENSMUST00000224598 627 ntBASIC7.13□□□□□ -1.27
CiitaP79621 AC113031.1-201ENSMUST00000227400 432 ntBASIC7.13□□□□□ -1.27
CiitaP79621 AC165106.1-201ENSMUST00000227580 408 ntBASIC7.13□□□□□ -1.27
CiitaP79621 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
CiitaP79621 Gm21731-201ENSMUST00000079524 489 ntBASIC7.13□□□□□ -1.27
CiitaP79621 Gm15732-201ENSMUST00000079794 480 ntBASIC7.13□□□□□ -1.27
CiitaP79621 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC7.13□□□□□ -1.27
CiitaP79621 AL450321.1-201ENSMUST00000220600 3550 ntBASIC7.13□□□□□ -1.27
CiitaP79621 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CiitaP79621 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC7.13□□□□□ -1.27
CiitaP79621 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
CiitaP79621 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
CiitaP79621 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CiitaP79621 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CiitaP79621 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
CiitaP79621 Gm21781-201ENSMUST00000178920 4838 ntBASIC7.13□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 94.4 ms