Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Lmo4P61969 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Lmo4P61969 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Lmo4P61969 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Lmo4P61969 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Lmo4P61969 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Lmo4P61969 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Lmo4P61969 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Lmo4P61969 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Lmo4P61969 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Lmo4P61969 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Lmo4P61969 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
Lmo4P61969 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Lmo4P61969 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Lmo4P61969 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Lmo4P61969 Gm37429-201ENSMUST00000193807 1799 ntBASIC5.29□□□□□ -1.56
Lmo4P61969 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Lmo4P61969 Gm36930-201ENSMUST00000195431 2376 ntBASIC5.29□□□□□ -1.56
Lmo4P61969 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Lmo4P61969 Olfr76-203ENSMUST00000214676 3175 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Lmo4P61969 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC5.29□□□□□ -1.56
Lmo4P61969 AC135669.2-201ENSMUST00000215636 4958 ntBASIC5.29□□□□□ -1.56
Lmo4P61969 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC5.29□□□□□ -1.56
Lmo4P61969 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Lmo4P61969 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Lmo4P61969 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Lmo4P61969 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
Lmo4P61969 Gm14802-201ENSMUST00000121944 1885 ntBASIC5.29□□□□□ -1.56
Lmo4P61969 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Lmo4P61969 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Lmo4P61969 Gm13740-201ENSMUST00000120590 310 ntBASIC5.29□□□□□ -1.56
Lmo4P61969 Gm14300-201ENSMUST00000120800 946 ntBASIC5.29□□□□□ -1.56
Lmo4P61969 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC5.29□□□□□ -1.56
Lmo4P61969 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Lmo4P61969 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC5.29□□□□□ -1.56
Lmo4P61969 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC5.29□□□□□ -1.56
Lmo4P61969 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Lmo4P61969 Gm18833-201ENSMUST00000173218 862 ntBASIC5.29□□□□□ -1.56
Lmo4P61969 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC5.29□□□□□ -1.56
Lmo4P61969 Gm9529-201ENSMUST00000177598 579 ntBASIC5.29□□□□□ -1.56
Lmo4P61969 Gm27005-201ENSMUST00000182783 921 ntBASIC5.29□□□□□ -1.56
Lmo4P61969 Gm5708-201ENSMUST00000196289 886 ntBASIC5.29□□□□□ -1.56
Lmo4P61969 Gm44809-201ENSMUST00000208305 993 ntBASIC5.29□□□□□ -1.56
Lmo4P61969 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC5.29□□□□□ -1.56
Lmo4P61969 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC5.29□□□□□ -1.56
Lmo4P61969 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC5.29□□□□□ -1.56
Lmo4P61969 CT025667.1-201ENSMUST00000225872 382 ntBASIC5.29□□□□□ -1.56
Lmo4P61969 AC137871.3-201ENSMUST00000226628 225 ntBASIC5.29□□□□□ -1.56
Lmo4P61969 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC5.29□□□□□ -1.56
Lmo4P61969 AC138765.2-202ENSMUST00000228418 3435 ntBASIC5.29□□□□□ -1.56
Lmo4P61969 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Lmo4P61969 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Lmo4P61969 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Lmo4P61969 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Lmo4P61969 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Lmo4P61969 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Lmo4P61969 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Lmo4P61969 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Lmo4P61969 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Lmo4P61969 Gm17167-201ENSMUST00000169242 5054 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Lmo4P61969 Gm38366-201ENSMUST00000193127 1934 ntBASIC5.29□□□□□ -1.56
Lmo4P61969 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Lmo4P61969 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Lmo4P61969 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Lmo4P61969 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Lmo4P61969 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Lmo4P61969 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Lmo4P61969 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Lmo4P61969 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC5.28□□□□□ -1.56
Lmo4P61969 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Lmo4P61969 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Lmo4P61969 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
Lmo4P61969 Adgrl4-201ENSMUST00000046977 4106 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Lmo4P61969 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Lmo4P61969 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
Lmo4P61969 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Lmo4P61969 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Lmo4P61969 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Lmo4P61969 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Lmo4P61969 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Lmo4P61969 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Lmo4P61969 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC5.28□□□□□ -1.56
Lmo4P61969 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Lmo4P61969 Gm22103-201ENSMUST00000116733 121 ntBASIC5.28□□□□□ -1.56
Lmo4P61969 Gm26475-201ENSMUST00000116769 121 ntBASIC5.28□□□□□ -1.56
Lmo4P61969 Gm23620-201ENSMUST00000116812 121 ntBASIC5.28□□□□□ -1.56
Lmo4P61969 Gm25042-201ENSMUST00000116856 121 ntBASIC5.28□□□□□ -1.56
Lmo4P61969 Gm25540-201ENSMUST00000116880 121 ntBASIC5.28□□□□□ -1.56
Lmo4P61969 Gm11821-201ENSMUST00000117335 979 ntBASIC5.28□□□□□ -1.56
Lmo4P61969 Gm6446-201ENSMUST00000120604 818 ntBASIC5.28□□□□□ -1.56
Lmo4P61969 Gm12181-201ENSMUST00000121448 531 ntBASIC5.28□□□□□ -1.56
Lmo4P61969 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Lmo4P61969 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Lmo4P61969 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC5.28□□□□□ -1.56
Lmo4P61969 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC5.28□□□□□ -1.56
Lmo4P61969 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC5.28□□□□□ -1.56
Lmo4P61969 Gm26410-201ENSMUST00000157670 261 ntBASIC5.28□□□□□ -1.56
Lmo4P61969 Gm24239-201ENSMUST00000157791 255 ntBASIC5.28□□□□□ -1.56
Lmo4P61969 Gm23894-201ENSMUST00000158107 313 ntBASIC5.28□□□□□ -1.56
Lmo4P61969 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms