Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sox3P53784 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Sox3P53784 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Sox3P53784 Gm37234-201ENSMUST00000193259 1441 ntBASIC6.33□□□□□ -1.4
Sox3P53784 Gm37423-201ENSMUST00000194246 3342 ntBASIC6.33□□□□□ -1.4
Sox3P53784 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sox3P53784 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Sox3P53784 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sox3P53784 CT573019.1-201ENSMUST00000227762 1689 ntBASIC6.33□□□□□ -1.4
Sox3P53784 Gm26575-201ENSMUST00000181714 2232 ntBASIC6.33□□□□□ -1.4
Sox3P53784 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Sox3P53784 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sox3P53784 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sox3P53784 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Sox3P53784 Gm43229-201ENSMUST00000201812 1850 ntBASIC6.33□□□□□ -1.4
Sox3P53784 Gm11984-201ENSMUST00000118142 766 ntBASIC6.33□□□□□ -1.4
Sox3P53784 Gm13940-201ENSMUST00000121023 301 ntBASIC6.33□□□□□ -1.4
Sox3P53784 Gm6451-201ENSMUST00000121488 717 ntBASIC6.33□□□□□ -1.4
Sox3P53784 Gm26346-201ENSMUST00000157525 329 ntBASIC6.33□□□□□ -1.4
Sox3P53784 Gm26323-201ENSMUST00000157743 175 ntBASIC6.33□□□□□ -1.4
Sox3P53784 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
Sox3P53784 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Sox3P53784 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
Sox3P53784 Gm38022-201ENSMUST00000191762 403 ntBASIC6.33□□□□□ -1.4
Sox3P53784 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC6.33□□□□□ -1.4
Sox3P53784 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Sox3P53784 Gm43576-201ENSMUST00000197937 871 ntBASIC6.33□□□□□ -1.4
Sox3P53784 Gm43089-201ENSMUST00000199162 275 ntBASIC6.33□□□□□ -1.4
Sox3P53784 Gm43233-201ENSMUST00000200491 616 ntBASIC6.33□□□□□ -1.4
Sox3P53784 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC6.33□□□□□ -1.4
Sox3P53784 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC6.33□□□□□ -1.4
Sox3P53784 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC6.33□□□□□ -1.4
Sox3P53784 AC158525.1-201ENSMUST00000223806 576 ntBASIC6.33□□□□□ -1.4
Sox3P53784 AC137902.1-201ENSMUST00000228184 102 ntBASIC6.33□□□□□ -1.4
Sox3P53784 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC6.33□□□□□ -1.4
Sox3P53784 Gm8526-201ENSMUST00000079153 475 ntBASIC6.33□□□□□ -1.4
Sox3P53784 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC6.33□□□□□ -1.4
Sox3P53784 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sox3P53784 Gm28322-201ENSMUST00000185627 1475 ntBASIC6.33□□□□□ -1.4
Sox3P53784 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sox3P53784 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Sox3P53784 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Sox3P53784 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Sox3P53784 Gm45516-201ENSMUST00000211588 4182 ntBASIC6.32□□□□□ -1.4
Sox3P53784 Gm18716-201ENSMUST00000204507 1603 ntBASIC6.32□□□□□ -1.4
Sox3P53784 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC6.32□□□□□ -1.4
Sox3P53784 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sox3P53784 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sox3P53784 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Sox3P53784 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sox3P53784 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
Sox3P53784 Gm14615-201ENSMUST00000117575 1816 ntBASIC6.32□□□□□ -1.4
Sox3P53784 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sox3P53784 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sox3P53784 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sox3P53784 CT030185.1-201ENSMUST00000222940 2289 ntBASIC6.32□□□□□ -1.4
Sox3P53784 AC162301.1-201ENSMUST00000228785 1542 ntBASIC6.32□□□□□ -1.4
Sox3P53784 Gm25724-201ENSMUST00000104531 117 ntBASIC6.32□□□□□ -1.4
Sox3P53784 Gm15750-201ENSMUST00000120970 616 ntBASIC6.32□□□□□ -1.4
Sox3P53784 Gm14251-201ENSMUST00000122133 279 ntBASIC6.32□□□□□ -1.4
Sox3P53784 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC6.32□□□□□ -1.4
Sox3P53784 Gm4613-201ENSMUST00000165488 276 ntBASIC6.32□□□□□ -1.4
Sox3P53784 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC6.32□□□□□ -1.4
Sox3P53784 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
Sox3P53784 Gm15257-201ENSMUST00000177680 883 ntBASIC6.32□□□□□ -1.4
Sox3P53784 Gm15252-201ENSMUST00000177750 883 ntBASIC6.32□□□□□ -1.4
Sox3P53784 Gm15256-201ENSMUST00000177793 883 ntBASIC6.32□□□□□ -1.4
Sox3P53784 Gm15260-201ENSMUST00000179402 883 ntBASIC6.32□□□□□ -1.4
Sox3P53784 Gm27005-201ENSMUST00000182783 921 ntBASIC6.32□□□□□ -1.4
Sox3P53784 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sox3P53784 Gm2229-201ENSMUST00000193328 710 ntBASIC6.32□□□□□ -1.4
Sox3P53784 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC6.32□□□□□ -1.4
Sox3P53784 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC6.32□□□□□ -1.4
Sox3P53784 Gm5717-201ENSMUST00000198243 1062 ntBASIC6.32□□□□□ -1.4
Sox3P53784 Gm8930-201ENSMUST00000201693 768 ntBASIC6.32□□□□□ -1.4
Sox3P53784 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC6.32□□□□□ -1.4
Sox3P53784 Gm43850-201ENSMUST00000202021 578 ntBASIC6.32□□□□□ -1.4
Sox3P53784 Gm44943-201ENSMUST00000207254 300 ntBASIC6.32□□□□□ -1.4
Sox3P53784 AC108846.4-201ENSMUST00000216783 341 ntBASIC6.32□□□□□ -1.4
Sox3P53784 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC6.32□□□□□ -1.4
Sox3P53784 AC113031.1-201ENSMUST00000227400 432 ntBASIC6.32□□□□□ -1.4
Sox3P53784 AC120375.2-202ENSMUST00000228722 397 ntBASIC6.32□□□□□ -1.4
Sox3P53784 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sox3P53784 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sox3P53784 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sox3P53784 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sox3P53784 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sox3P53784 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC6.32□□□□□ -1.4
Sox3P53784 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
Sox3P53784 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC6.32□□□□□ -1.4
Sox3P53784 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sox3P53784 AC103672.2-201ENSMUST00000228146 1687 ntBASIC6.32□□□□□ -1.4
Sox3P53784 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sox3P53784 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC6.32□□□□□ -1.4
Sox3P53784 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sox3P53784 AC124581.3-201ENSMUST00000224270 1624 ntBASIC6.32□□□□□ -1.4
Sox3P53784 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sox3P53784 Gm15789-201ENSMUST00000118992 1359 ntBASIC6.31□□□□□ -1.4
Sox3P53784 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Sox3P53784 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 99.1 ms