Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 AC107663.1-201ENSMUST00000224257 468 ntBASIC7.11□□□□□ -1.27
Shmt1P50431 AC091237.1-201ENSMUST00000224911 637 ntBASIC7.11□□□□□ -1.27
Shmt1P50431 AC167013.4-201ENSMUST00000226712 317 ntBASIC7.11□□□□□ -1.27
Shmt1P50431 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Shmt1P50431 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Shmt1P50431 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Shmt1P50431 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Shmt1P50431 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
Shmt1P50431 AC120347.1-201ENSMUST00000223326 1639 ntBASIC7.11□□□□□ -1.27
Shmt1P50431 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Shmt1P50431 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Shmt1P50431 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Shmt1P50431 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
Shmt1P50431 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC7.11□□□□□ -1.27
Shmt1P50431 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC7.11□□□□□ -1.27
Shmt1P50431 Gm7337-202ENSMUST00000181439 2655 ntBASIC7.11□□□□□ -1.27
Shmt1P50431 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Shmt1P50431 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC7.11□□□□□ -1.27
Shmt1P50431 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Shmt1P50431 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Shmt1P50431 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC7.1□□□□□ -1.27
Shmt1P50431 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Shmt1P50431 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC7.1□□□□□ -1.27
Shmt1P50431 Pramel-201ENSMUST00000118979 1383 ntBASIC7.1□□□□□ -1.27
Shmt1P50431 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Shmt1P50431 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC7.1□□□□□ -1.27
Shmt1P50431 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Shmt1P50431 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC7.1□□□□□ -1.27
Shmt1P50431 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Shmt1P50431 Gm28359-201ENSMUST00000187470 1322 ntBASIC7.1□□□□□ -1.27
Shmt1P50431 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Shmt1P50431 AC138284.1-201ENSMUST00000214258 3236 ntBASIC7.1□□□□□ -1.27
Shmt1P50431 Gm21781-201ENSMUST00000178920 4838 ntBASIC7.1□□□□□ -1.27
Shmt1P50431 Gm23979-201ENSMUST00000104071 128 ntBASIC7.1□□□□□ -1.27
Shmt1P50431 Gm24790-201ENSMUST00000104285 132 ntBASIC7.1□□□□□ -1.27
Shmt1P50431 Gm12842-201ENSMUST00000117298 476 ntBASIC7.1□□□□□ -1.27
Shmt1P50431 Gm11445-201ENSMUST00000119101 532 ntBASIC7.1□□□□□ -1.27
Shmt1P50431 Mir1900-201ENSMUST00000122714 78 ntBASIC7.1□□□□□ -1.27
Shmt1P50431 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC7.1□□□□□ -1.27
Shmt1P50431 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Shmt1P50431 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC7.1□□□□□ -1.27
Shmt1P50431 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC7.1□□□□□ -1.27
Shmt1P50431 Gm25971-201ENSMUST00000158953 286 ntBASIC7.1□□□□□ -1.27
Shmt1P50431 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC7.1□□□□□ -1.27
Shmt1P50431 Gm27295-201ENSMUST00000184264 153 ntBASIC7.1□□□□□ -1.27
Shmt1P50431 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC7.1□□□□□ -1.27
Shmt1P50431 Gm37285-201ENSMUST00000194465 1139 ntBASIC7.1□□□□□ -1.27
Shmt1P50431 Gm37901-201ENSMUST00000195107 514 ntBASIC7.1□□□□□ -1.27
Shmt1P50431 Gm29784-201ENSMUST00000196217 406 ntBASIC7.1□□□□□ -1.27
Shmt1P50431 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC7.1□□□□□ -1.27
Shmt1P50431 Gm43576-201ENSMUST00000197937 871 ntBASIC7.1□□□□□ -1.27
Shmt1P50431 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Shmt1P50431 Gm18839-201ENSMUST00000204292 670 ntBASIC7.1□□□□□ -1.27
Shmt1P50431 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC7.1□□□□□ -1.27
Shmt1P50431 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Shmt1P50431 Gm5655-201ENSMUST00000221078 901 ntBASIC7.1□□□□□ -1.27
Shmt1P50431 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC7.1□□□□□ -1.27
Shmt1P50431 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Shmt1P50431 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Shmt1P50431 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Shmt1P50431 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Shmt1P50431 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Shmt1P50431 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC7.1□□□□□ -1.27
Shmt1P50431 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Shmt1P50431 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Shmt1P50431 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
Shmt1P50431 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Shmt1P50431 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Shmt1P50431 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Shmt1P50431 Gm42975-201ENSMUST00000200612 1491 ntBASIC7.1□□□□□ -1.27
Shmt1P50431 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Shmt1P50431 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Shmt1P50431 Gm38070-201ENSMUST00000191850 6480 ntBASIC7.09□□□□□ -1.27
Shmt1P50431 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Shmt1P50431 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Shmt1P50431 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Shmt1P50431 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Shmt1P50431 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Shmt1P50431 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Shmt1P50431 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Shmt1P50431 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Shmt1P50431 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Shmt1P50431 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Shmt1P50431 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Shmt1P50431 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Shmt1P50431 Gm44620-201ENSMUST00000209183 2887 ntBASIC7.09□□□□□ -1.27
Shmt1P50431 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Shmt1P50431 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Shmt1P50431 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Shmt1P50431 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC7.09□□□□□ -1.27
Shmt1P50431 Gm13176-201ENSMUST00000117910 477 ntBASIC7.09□□□□□ -1.27
Shmt1P50431 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC7.09□□□□□ -1.27
Shmt1P50431 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Shmt1P50431 Gm4992-201ENSMUST00000120256 768 ntBASIC7.09□□□□□ -1.27
Shmt1P50431 Gm12101-201ENSMUST00000121590 390 ntBASIC7.09□□□□□ -1.27
Shmt1P50431 Gm11609-201ENSMUST00000121926 793 ntBASIC7.09□□□□□ -1.27
Shmt1P50431 Gm3810-201ENSMUST00000122413 476 ntBASIC7.09□□□□□ -1.27
Shmt1P50431 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Shmt1P50431 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Shmt1P50431 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms