Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC6.74□□□□□ -1.33
LdlrP35951 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LdlrP35951 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
LdlrP35951 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
LdlrP35951 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LdlrP35951 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
LdlrP35951 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
LdlrP35951 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LdlrP35951 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC6.74□□□□□ -1.33
LdlrP35951 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
LdlrP35951 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LdlrP35951 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
LdlrP35951 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
LdlrP35951 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LdlrP35951 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
LdlrP35951 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC6.73□□□□□ -1.33
LdlrP35951 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC6.73□□□□□ -1.33
LdlrP35951 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
LdlrP35951 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
LdlrP35951 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
LdlrP35951 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
LdlrP35951 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC6.73□□□□□ -1.33
LdlrP35951 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
LdlrP35951 Gm13900-201ENSMUST00000119402 498 ntBASIC6.73□□□□□ -1.33
LdlrP35951 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC6.73□□□□□ -1.33
LdlrP35951 Gm12731-201ENSMUST00000120932 268 ntBASIC6.73□□□□□ -1.33
LdlrP35951 Gm15188-201ENSMUST00000121264 704 ntBASIC6.73□□□□□ -1.33
LdlrP35951 Gm12321-201ENSMUST00000121485 804 ntBASIC6.73□□□□□ -1.33
LdlrP35951 Gm21990-201ENSMUST00000124692 383 ntBASIC6.73□□□□□ -1.33
LdlrP35951 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
LdlrP35951 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
LdlrP35951 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
LdlrP35951 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
LdlrP35951 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC6.73□□□□□ -1.33
LdlrP35951 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LdlrP35951 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC6.73□□□□□ -1.33
LdlrP35951 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC6.73□□□□□ -1.33
LdlrP35951 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
LdlrP35951 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC6.73□□□□□ -1.33
LdlrP35951 Mir7084-201ENSMUST00000183876 70 ntBASIC6.73□□□□□ -1.33
LdlrP35951 Mir378d-201ENSMUST00000184232 110 ntBASIC6.73□□□□□ -1.33
LdlrP35951 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC6.73□□□□□ -1.33
LdlrP35951 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
LdlrP35951 Gm37708-201ENSMUST00000192337 895 ntBASIC6.73□□□□□ -1.33
LdlrP35951 Gm44694-201ENSMUST00000205317 1298 ntBASIC6.73□□□□□ -1.33
LdlrP35951 Gm44615-201ENSMUST00000206548 358 ntBASIC6.73□□□□□ -1.33
LdlrP35951 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
LdlrP35951 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC6.73□□□□□ -1.33
LdlrP35951 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
LdlrP35951 AC116589.4-201ENSMUST00000222390 216 ntBASIC6.73□□□□□ -1.33
LdlrP35951 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
LdlrP35951 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
LdlrP35951 CT009733.1-203ENSMUST00000224033 451 ntBASIC6.73□□□□□ -1.33
LdlrP35951 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LdlrP35951 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LdlrP35951 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC6.73□□□□□ -1.33
LdlrP35951 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
LdlrP35951 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
LdlrP35951 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
LdlrP35951 Gm45073-201ENSMUST00000207688 4247 ntBASIC6.73□□□□□ -1.33
LdlrP35951 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
LdlrP35951 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
LdlrP35951 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LdlrP35951 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LdlrP35951 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
LdlrP35951 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
LdlrP35951 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
LdlrP35951 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LdlrP35951 Gm38276-201ENSMUST00000192446 1343 ntBASIC6.73□□□□□ -1.33
LdlrP35951 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LdlrP35951 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
LdlrP35951 Gm37914-201ENSMUST00000195317 2679 ntBASIC6.73□□□□□ -1.33
LdlrP35951 Gm37967-201ENSMUST00000195634 2665 ntBASIC6.73□□□□□ -1.33
LdlrP35951 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
LdlrP35951 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
LdlrP35951 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC6.72□□□□□ -1.33
LdlrP35951 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
LdlrP35951 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
LdlrP35951 AC022682.2-202ENSMUST00000224394 3943 ntBASIC6.72□□□□□ -1.33
LdlrP35951 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
LdlrP35951 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC6.72□□□□□ -1.33
LdlrP35951 Gm28874-201ENSMUST00000190917 3134 ntBASIC6.72□□□□□ -1.33
LdlrP35951 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC6.72□□□□□ -1.33
LdlrP35951 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC6.72□□□□□ -1.33
LdlrP35951 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
LdlrP35951 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
LdlrP35951 Gm42989-201ENSMUST00000200646 2306 ntBASIC6.72□□□□□ -1.33
LdlrP35951 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC6.72□□□□□ -1.33
LdlrP35951 Gm44289-201ENSMUST00000204144 1390 ntBASIC6.72□□□□□ -1.33
LdlrP35951 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
LdlrP35951 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
LdlrP35951 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
LdlrP35951 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
LdlrP35951 AC159196.3-201ENSMUST00000224307 1841 ntBASIC6.72□□□□□ -1.33
LdlrP35951 Mir669p-2-201ENSMUST00000103868 87 ntBASIC6.72□□□□□ -1.33
LdlrP35951 Mir669p-1-201ENSMUST00000103884 87 ntBASIC6.72□□□□□ -1.33
LdlrP35951 Gm11318-201ENSMUST00000118640 961 ntBASIC6.72□□□□□ -1.33
LdlrP35951 Gm5843-201ENSMUST00000121631 476 ntBASIC6.72□□□□□ -1.33
LdlrP35951 Gm15529-201ENSMUST00000121833 994 ntBASIC6.72□□□□□ -1.33
LdlrP35951 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 101.3 ms