Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC5.19□□□□□ -1.58
Sdc1P18828 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC5.19□□□□□ -1.58
Sdc1P18828 Lsmem1-202ENSMUST00000220951 2152 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Sdc1P18828 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Sdc1P18828 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Sdc1P18828 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Sdc1P18828 AC174459.1-201ENSMUST00000224476 1943 ntBASIC5.19□□□□□ -1.58
Sdc1P18828 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Sdc1P18828 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.19□□□□□ -1.58
Sdc1P18828 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
Sdc1P18828 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC5.19□□□□□ -1.58
Sdc1P18828 Gm15971-201ENSMUST00000119372 211 ntBASIC5.19□□□□□ -1.58
Sdc1P18828 Gm11263-201ENSMUST00000121853 749 ntBASIC5.19□□□□□ -1.58
Sdc1P18828 Gm24893-201ENSMUST00000122745 369 ntBASIC5.19□□□□□ -1.58
Sdc1P18828 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC5.19□□□□□ -1.58
Sdc1P18828 Gm13134-201ENSMUST00000132106 738 ntTSL 3 BASIC5.19□□□□□ -1.58
Sdc1P18828 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC5.19□□□□□ -1.58
Sdc1P18828 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Sdc1P18828 Gm26070-201ENSMUST00000157500 137 ntBASIC5.19□□□□□ -1.58
Sdc1P18828 Gm17046-201ENSMUST00000168078 850 ntBASIC5.19□□□□□ -1.58
Sdc1P18828 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Sdc1P18828 Six3os1-213ENSMUST00000177487 537 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Sdc1P18828 Gm26980-201ENSMUST00000183321 395 ntBASIC5.19□□□□□ -1.58
Sdc1P18828 Gm8304-201ENSMUST00000185744 584 ntBASIC5.19□□□□□ -1.58
Sdc1P18828 Gm20926-201ENSMUST00000194457 696 ntBASIC5.19□□□□□ -1.58
Sdc1P18828 Gm5857-201ENSMUST00000198953 493 ntBASIC5.19□□□□□ -1.58
Sdc1P18828 D130017N08Rik-204ENSMUST00000199836 506 ntTSL 2 BASIC5.19□□□□□ -1.58
Sdc1P18828 Gm17768-201ENSMUST00000201257 378 ntTSL 5 BASIC5.19□□□□□ -1.58
Sdc1P18828 Gm42799-201ENSMUST00000201331 328 ntBASIC5.19□□□□□ -1.58
Sdc1P18828 Gm43226-201ENSMUST00000202438 259 ntBASIC5.19□□□□□ -1.58
Sdc1P18828 Gm5110-201ENSMUST00000203122 1063 ntBASIC5.19□□□□□ -1.58
Sdc1P18828 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Sdc1P18828 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Sdc1P18828 AC154734.1-201ENSMUST00000219957 2141 ntBASIC5.19□□□□□ -1.58
Sdc1P18828 AV026068-220ENSMUST00000224153 1147 ntBASIC5.19□□□□□ -1.58
Sdc1P18828 1700066J03Rik-202ENSMUST00000224280 516 ntBASIC5.19□□□□□ -1.58
Sdc1P18828 CT030705.2-201ENSMUST00000225301 556 ntBASIC5.19□□□□□ -1.58
Sdc1P18828 AC132317.2-201ENSMUST00000227301 519 ntBASIC5.19□□□□□ -1.58
Sdc1P18828 AC154283.1-201ENSMUST00000228417 389 ntBASIC5.19□□□□□ -1.58
Sdc1P18828 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC5.19□□□□□ -1.58
Sdc1P18828 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
Sdc1P18828 Cd74-201ENSMUST00000050487 1218 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Sdc1P18828 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Sdc1P18828 Lyrm2-201ENSMUST00000062802 465 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Sdc1P18828 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Sdc1P18828 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Sdc1P18828 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC5.19□□□□□ -1.58
Sdc1P18828 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Sdc1P18828 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
Sdc1P18828 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Sdc1P18828 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Sdc1P18828 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Sdc1P18828 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
Sdc1P18828 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Sdc1P18828 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Sdc1P18828 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Sdc1P18828 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
Sdc1P18828 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Sdc1P18828 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Sdc1P18828 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Sdc1P18828 Gm43523-201ENSMUST00000197397 2878 ntBASIC5.18□□□□□ -1.58
Sdc1P18828 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Sdc1P18828 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Sdc1P18828 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Sdc1P18828 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
Sdc1P18828 Gm37140-201ENSMUST00000192914 1684 ntBASIC5.18□□□□□ -1.58
Sdc1P18828 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sdc1P18828 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC5.18□□□□□ -1.58
Sdc1P18828 AC132852.2-201ENSMUST00000216052 2794 ntBASIC5.18□□□□□ -1.58
Sdc1P18828 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Sdc1P18828 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Sdc1P18828 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Sdc1P18828 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sdc1P18828 CT025686.2-201ENSMUST00000227898 3315 ntBASIC5.18□□□□□ -1.58
Sdc1P18828 Gm43410-201ENSMUST00000197510 2234 ntBASIC5.18□□□□□ -1.58
Sdc1P18828 Gm11290-204ENSMUST00000224688 3042 ntBASIC5.18□□□□□ -1.58
Sdc1P18828 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Sdc1P18828 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Sdc1P18828 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC5.18□□□□□ -1.58
Sdc1P18828 Gm13260-201ENSMUST00000117797 1264 ntBASIC5.18□□□□□ -1.58
Sdc1P18828 Gm15621-201ENSMUST00000119162 364 ntBASIC5.18□□□□□ -1.58
Sdc1P18828 Gm13593-201ENSMUST00000121329 692 ntBASIC5.18□□□□□ -1.58
Sdc1P18828 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC5.18□□□□□ -1.58
Sdc1P18828 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Sdc1P18828 Gm22670-201ENSMUST00000158724 143 ntBASIC5.18□□□□□ -1.58
Sdc1P18828 Gm15699-201ENSMUST00000159213 280 ntTSL 5 BASIC5.18□□□□□ -1.58
Sdc1P18828 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Sdc1P18828 Gm17212-201ENSMUST00000166666 259 ntBASIC5.18□□□□□ -1.58
Sdc1P18828 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Sdc1P18828 Gm20615-201ENSMUST00000177503 705 ntBASIC5.18□□□□□ -1.58
Sdc1P18828 Gm9529-201ENSMUST00000177598 579 ntBASIC5.18□□□□□ -1.58
Sdc1P18828 Gm9149-201ENSMUST00000182724 1007 ntBASIC5.18□□□□□ -1.58
Sdc1P18828 Gm27373-201ENSMUST00000184017 184 ntBASIC5.18□□□□□ -1.58
Sdc1P18828 Gm21013-201ENSMUST00000184952 1201 ntBASIC5.18□□□□□ -1.58
Sdc1P18828 Gm6610-201ENSMUST00000186324 358 ntBASIC5.18□□□□□ -1.58
Sdc1P18828 Gm18033-201ENSMUST00000186678 550 ntBASIC5.18□□□□□ -1.58
Sdc1P18828 Gm29385-201ENSMUST00000186831 363 ntBASIC5.18□□□□□ -1.58
Sdc1P18828 Gm20561-201ENSMUST00000188131 292 ntBASIC5.18□□□□□ -1.58
Sdc1P18828 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC5.18□□□□□ -1.58
Sdc1P18828 Gm43655-201ENSMUST00000197367 222 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms