Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Cdx1P18111 Gm45548-201ENSMUST00000210076 3167 ntBASIC5.37□□□□□ -1.55
Cdx1P18111 Gm45117-201ENSMUST00000207250 1774 ntBASIC5.37□□□□□ -1.55
Cdx1P18111 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC5.37□□□□□ -1.55
Cdx1P18111 AC131747.2-201ENSMUST00000226121 1895 ntBASIC5.37□□□□□ -1.55
Cdx1P18111 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Cdx1P18111 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Cdx1P18111 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Cdx1P18111 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Cdx1P18111 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
Cdx1P18111 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
Cdx1P18111 Gm5752-201ENSMUST00000117771 594 ntBASIC5.37□□□□□ -1.55
Cdx1P18111 Gm15739-201ENSMUST00000118049 872 ntBASIC5.37□□□□□ -1.55
Cdx1P18111 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Cdx1P18111 Gm11689-201ENSMUST00000120766 302 ntBASIC5.37□□□□□ -1.55
Cdx1P18111 Gm7746-201ENSMUST00000120966 503 ntBASIC5.37□□□□□ -1.55
Cdx1P18111 Gm14728-201ENSMUST00000122196 492 ntBASIC5.37□□□□□ -1.55
Cdx1P18111 Trav8-2-201ENSMUST00000130122 337 ntBASIC5.37□□□□□ -1.55
Cdx1P18111 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Cdx1P18111 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Cdx1P18111 Gm23018-201ENSMUST00000177928 109 ntBASIC5.37□□□□□ -1.55
Cdx1P18111 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Cdx1P18111 Gm29197-201ENSMUST00000185922 702 ntBASIC5.37□□□□□ -1.55
Cdx1P18111 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Cdx1P18111 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Cdx1P18111 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC5.37□□□□□ -1.55
Cdx1P18111 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC5.37□□□□□ -1.55
Cdx1P18111 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC5.37□□□□□ -1.55
Cdx1P18111 Gm38200-201ENSMUST00000192083 2111 ntBASIC5.37□□□□□ -1.55
Cdx1P18111 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cdx1P18111 Gm8920-201ENSMUST00000196153 924 ntBASIC5.37□□□□□ -1.55
Cdx1P18111 Gm43147-201ENSMUST00000196944 542 ntBASIC5.37□□□□□ -1.55
Cdx1P18111 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC5.37□□□□□ -1.55
Cdx1P18111 Gm44258-201ENSMUST00000204925 301 ntBASIC5.37□□□□□ -1.55
Cdx1P18111 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC5.37□□□□□ -1.55
Cdx1P18111 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Cdx1P18111 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC5.37□□□□□ -1.55
Cdx1P18111 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC5.37□□□□□ -1.55
Cdx1P18111 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC5.37□□□□□ -1.55
Cdx1P18111 CT009711.2-202ENSMUST00000224538 973 ntBASIC5.37□□□□□ -1.55
Cdx1P18111 AC154640.3-201ENSMUST00000227492 846 ntBASIC5.37□□□□□ -1.55
Cdx1P18111 AC154627.1-201ENSMUST00000228799 1286 ntBASIC5.37□□□□□ -1.55
Cdx1P18111 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Cdx1P18111 Olfr683-201ENSMUST00000061284 960 ntBASIC5.37□□□□□ -1.55
Cdx1P18111 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Cdx1P18111 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Cdx1P18111 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Cdx1P18111 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
Cdx1P18111 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cdx1P18111 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cdx1P18111 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Cdx1P18111 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cdx1P18111 Gm7961-201ENSMUST00000201338 1436 ntBASIC5.37□□□□□ -1.55
Cdx1P18111 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
Cdx1P18111 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Cdx1P18111 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Cdx1P18111 AC164297.2-201ENSMUST00000224388 1508 ntBASIC5.37□□□□□ -1.55
Cdx1P18111 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Cdx1P18111 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Cdx1P18111 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cdx1P18111 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC5.37□□□□□ -1.55
Cdx1P18111 Gm8401-201ENSMUST00000120248 1739 ntBASIC5.37□□□□□ -1.55
Cdx1P18111 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cdx1P18111 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
Cdx1P18111 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
Cdx1P18111 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Cdx1P18111 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Cdx1P18111 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Cdx1P18111 Gm42492-201ENSMUST00000195780 2915 ntBASIC5.36□□□□□ -1.55
Cdx1P18111 Thap6-201ENSMUST00000191860 3151 ntBASIC5.36□□□□□ -1.55
Cdx1P18111 Gm37087-201ENSMUST00000192966 3309 ntBASIC5.36□□□□□ -1.55
Cdx1P18111 Gm37752-201ENSMUST00000193494 3309 ntBASIC5.36□□□□□ -1.55
Cdx1P18111 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Cdx1P18111 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Cdx1P18111 Gm12635-201ENSMUST00000117285 752 ntBASIC5.36□□□□□ -1.55
Cdx1P18111 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
Cdx1P18111 Gm12713-201ENSMUST00000118404 764 ntBASIC5.36□□□□□ -1.55
Cdx1P18111 Gm12375-201ENSMUST00000119331 921 ntBASIC5.36□□□□□ -1.55
Cdx1P18111 Gm8421-201ENSMUST00000119439 305 ntBASIC5.36□□□□□ -1.55
Cdx1P18111 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Cdx1P18111 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC5.36□□□□□ -1.55
Cdx1P18111 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC5.36□□□□□ -1.55
Cdx1P18111 Gm24011-201ENSMUST00000157732 268 ntBASIC5.36□□□□□ -1.55
Cdx1P18111 Gm23069-201ENSMUST00000158240 311 ntBASIC5.36□□□□□ -1.55
Cdx1P18111 Gm22116-201ENSMUST00000158791 141 ntBASIC5.36□□□□□ -1.55
Cdx1P18111 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.36□□□□□ -1.55
Cdx1P18111 Gm2619-202ENSMUST00000166777 651 ntBASIC5.36□□□□□ -1.55
Cdx1P18111 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC5.36□□□□□ -1.55
Cdx1P18111 Mir6921-201ENSMUST00000183719 80 ntBASIC5.36□□□□□ -1.55
Cdx1P18111 Gm29383-201ENSMUST00000188284 480 ntBASIC5.36□□□□□ -1.55
Cdx1P18111 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC5.36□□□□□ -1.55
Cdx1P18111 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC5.36□□□□□ -1.55
Cdx1P18111 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC5.36□□□□□ -1.55
Cdx1P18111 Gm38079-201ENSMUST00000195603 154 ntBASIC5.36□□□□□ -1.55
Cdx1P18111 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC5.36□□□□□ -1.55
Cdx1P18111 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC5.36□□□□□ -1.55
Cdx1P18111 Gm5050-201ENSMUST00000197164 775 ntBASIC5.36□□□□□ -1.55
Cdx1P18111 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC5.36□□□□□ -1.55
Cdx1P18111 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC5.36□□□□□ -1.55
Cdx1P18111 Gm42646-201ENSMUST00000202233 914 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms