Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Chmp6P0C0A3 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC7.06□□□□□ -1.28
Chmp6P0C0A3 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Chmp6P0C0A3 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC7.06□□□□□ -1.28
Chmp6P0C0A3 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
Chmp6P0C0A3 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Chmp6P0C0A3 Gm28874-201ENSMUST00000190917 3134 ntBASIC7.06□□□□□ -1.28
Chmp6P0C0A3 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Chmp6P0C0A3 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC7.06□□□□□ -1.28
Chmp6P0C0A3 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Chmp6P0C0A3 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
Chmp6P0C0A3 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Chmp6P0C0A3 n-R5s172-201ENSMUST00000104508 114 ntBASIC7.06□□□□□ -1.28
Chmp6P0C0A3 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC7.06□□□□□ -1.28
Chmp6P0C0A3 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC7.06□□□□□ -1.28
Chmp6P0C0A3 Gm3810-201ENSMUST00000122413 476 ntBASIC7.06□□□□□ -1.28
Chmp6P0C0A3 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Chmp6P0C0A3 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC7.06□□□□□ -1.28
Chmp6P0C0A3 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Chmp6P0C0A3 4930445N08Rik-201ENSMUST00000156925 313 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Chmp6P0C0A3 Gm25550-201ENSMUST00000158079 128 ntBASIC7.06□□□□□ -1.28
Chmp6P0C0A3 Gm16298-201ENSMUST00000161107 420 ntBASIC7.06□□□□□ -1.28
Chmp6P0C0A3 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Chmp6P0C0A3 Gm22569-201ENSMUST00000175545 124 ntBASIC7.06□□□□□ -1.28
Chmp6P0C0A3 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC7.06□□□□□ -1.28
Chmp6P0C0A3 Gm8190-201ENSMUST00000199603 586 ntBASIC7.06□□□□□ -1.28
Chmp6P0C0A3 Gm17918-201ENSMUST00000205315 574 ntBASIC7.06□□□□□ -1.28
Chmp6P0C0A3 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Chmp6P0C0A3 AC133598.3-204ENSMUST00000224260 767 ntBASIC7.06□□□□□ -1.28
Chmp6P0C0A3 CT030238.4-202ENSMUST00000226143 745 ntBASIC7.06□□□□□ -1.28
Chmp6P0C0A3 n-R5s217-201ENSMUST00000083341 116 ntBASIC7.06□□□□□ -1.28
Chmp6P0C0A3 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Chmp6P0C0A3 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Chmp6P0C0A3 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC7.06□□□□□ -1.28
Chmp6P0C0A3 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Chmp6P0C0A3 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Chmp6P0C0A3 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Chmp6P0C0A3 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Chmp6P0C0A3 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Chmp6P0C0A3 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
Chmp6P0C0A3 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Chmp6P0C0A3 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Chmp6P0C0A3 AC164567.3-201ENSMUST00000217743 2869 ntBASIC7.06□□□□□ -1.28
Chmp6P0C0A3 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Chmp6P0C0A3 Gm42613-201ENSMUST00000199975 1931 ntBASIC7.05□□□□□ -1.28
Chmp6P0C0A3 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Chmp6P0C0A3 Gm42975-201ENSMUST00000200612 1491 ntBASIC7.05□□□□□ -1.28
Chmp6P0C0A3 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Chmp6P0C0A3 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Chmp6P0C0A3 Gm43880-201ENSMUST00000203635 2162 ntBASIC7.05□□□□□ -1.28
Chmp6P0C0A3 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC7.05□□□□□ -1.28
Chmp6P0C0A3 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Chmp6P0C0A3 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Chmp6P0C0A3 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Chmp6P0C0A3 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC7.05□□□□□ -1.28
Chmp6P0C0A3 Gm24790-201ENSMUST00000104285 132 ntBASIC7.05□□□□□ -1.28
Chmp6P0C0A3 Gm14513-201ENSMUST00000117403 123 ntBASIC7.05□□□□□ -1.28
Chmp6P0C0A3 Gm14733-201ENSMUST00000117680 133 ntBASIC7.05□□□□□ -1.28
Chmp6P0C0A3 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Chmp6P0C0A3 Gm6654-201ENSMUST00000118950 348 ntBASIC7.05□□□□□ -1.28
Chmp6P0C0A3 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
Chmp6P0C0A3 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Chmp6P0C0A3 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Chmp6P0C0A3 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC7.05□□□□□ -1.28
Chmp6P0C0A3 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Chmp6P0C0A3 Gm26046-201ENSMUST00000157312 166 ntBASIC7.05□□□□□ -1.28
Chmp6P0C0A3 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC7.05□□□□□ -1.28
Chmp6P0C0A3 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Chmp6P0C0A3 Gm27186-201ENSMUST00000184223 307 ntBASIC7.05□□□□□ -1.28
Chmp6P0C0A3 Gm28023-201ENSMUST00000184556 60 ntBASIC7.05□□□□□ -1.28
Chmp6P0C0A3 Gm27825-201ENSMUST00000184586 60 ntBASIC7.05□□□□□ -1.28
Chmp6P0C0A3 Gm9127-201ENSMUST00000188041 985 ntBASIC7.05□□□□□ -1.28
Chmp6P0C0A3 Gm29072-201ENSMUST00000191149 678 ntBASIC7.05□□□□□ -1.28
Chmp6P0C0A3 Gm37493-201ENSMUST00000193167 433 ntBASIC7.05□□□□□ -1.28
Chmp6P0C0A3 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Chmp6P0C0A3 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Chmp6P0C0A3 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Chmp6P0C0A3 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Chmp6P0C0A3 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Chmp6P0C0A3 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Chmp6P0C0A3 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Chmp6P0C0A3 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Chmp6P0C0A3 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Chmp6P0C0A3 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Chmp6P0C0A3 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Chmp6P0C0A3 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Chmp6P0C0A3 Gm37518-201ENSMUST00000194930 2603 ntBASIC7.05□□□□□ -1.28
Chmp6P0C0A3 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Chmp6P0C0A3 AC130831.1-201ENSMUST00000224546 1474 ntBASIC7.04□□□□□ -1.28
Chmp6P0C0A3 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Chmp6P0C0A3 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Chmp6P0C0A3 AC132465.1-201ENSMUST00000219938 1307 ntBASIC7.04□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms