Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Gm24069-201ENSMUST00000104512 127 ntBASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Gm16016-201ENSMUST00000120831 550 ntBASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC6.57□□□□□ -1.36
Srp54bE9PXC0 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Gm18752-201ENSMUST00000192876 608 ntBASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC6.57□□□□□ -1.36
Srp54bE9PXC0 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Gm43748-201ENSMUST00000202329 1233 ntBASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Gm44705-201ENSMUST00000206719 339 ntBASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Gm10205-201ENSMUST00000087431 234 ntBASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Gm44185-201ENSMUST00000204539 3307 ntBASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Gm21036-201ENSMUST00000207544 2611 ntBASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Srp54bE9PXC0 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Srp54bE9PXC0 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Gm18879-201ENSMUST00000221187 1537 ntBASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Gm4073-201ENSMUST00000176792 3500 ntBASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Gm24272-201ENSMUST00000102329 98 ntBASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Gm14772-201ENSMUST00000116562 514 ntBASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Gm14375-201ENSMUST00000119490 855 ntBASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Gm4997-201ENSMUST00000154056 360 ntBASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Gm10177-201ENSMUST00000160052 444 ntBASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Gm22569-201ENSMUST00000175545 124 ntBASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Gm37689-201ENSMUST00000193139 275 ntBASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Gm44163-201ENSMUST00000205140 475 ntBASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Srp54bE9PXC0 n-R5s97-201ENSMUST00000082585 113 ntBASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Gm6990-201ENSMUST00000086830 348 ntBASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Gm43335-201ENSMUST00000198299 3276 ntBASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Gm43880-201ENSMUST00000203635 2162 ntBASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Gm37289-201ENSMUST00000195409 1402 ntBASIC6.56□□□□□ -1.36
Srp54bE9PXC0 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Srp54bE9PXC0 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Srp54bE9PXC0 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Srp54bE9PXC0 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC6.55□□□□□ -1.36
Srp54bE9PXC0 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC6.55□□□□□ -1.36
Srp54bE9PXC0 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Srp54bE9PXC0 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms