Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Ambra1-201ENSMUST00000045699 4690 ntTSL 5 BASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 9930111J21Rik1-202ENSMUST00000097494 3863 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
Col6a3E9PWQ3 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC6.21□□□□□ -1.41
Col6a3E9PWQ3 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Col6a3E9PWQ3 Gm17511-201ENSMUST00000172206 342 ntBASIC6.21□□□□□ -1.41
Col6a3E9PWQ3 Gm6717-201ENSMUST00000185549 838 ntBASIC6.21□□□□□ -1.41
Col6a3E9PWQ3 Gm37376-201ENSMUST00000192176 453 ntBASIC6.21□□□□□ -1.41
Col6a3E9PWQ3 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC6.21□□□□□ -1.41
Col6a3E9PWQ3 Olfr1214-202ENSMUST00000216026 2126 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Col6a3E9PWQ3 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC6.21□□□□□ -1.41
Col6a3E9PWQ3 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC6.21□□□□□ -1.41
Col6a3E9PWQ3 Vmn1r181-205ENSMUST00000228399 4616 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
Col6a3E9PWQ3 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Col6a3E9PWQ3 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Col6a3E9PWQ3 Mrpl19-201ENSMUST00000032124 5000 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Col6a3E9PWQ3 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Tardbp-202ENSMUST00000084125 7477 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Kpna6-202ENSMUST00000102590 5710 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Gm37403-201ENSMUST00000193775 3521 ntBASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Gm15709-201ENSMUST00000118354 213 ntBASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Gm12186-201ENSMUST00000119050 945 ntBASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Gm26570-201ENSMUST00000180672 342 ntBASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Gm5946-201ENSMUST00000182340 970 ntBASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Gm27004-201ENSMUST00000183300 727 ntBASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Gm19002-201ENSMUST00000192649 1012 ntBASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Gm18215-201ENSMUST00000204429 798 ntBASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Gm45731-201ENSMUST00000211988 1203 ntBASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Gm43187-201ENSMUST00000200652 2397 ntBASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Gm29670-201ENSMUST00000190228 2491 ntBASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Cacna1c-213ENSMUST00000188078 6519 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Cacna1c-217ENSMUST00000188865 6519 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Gm37570-201ENSMUST00000195411 3106 ntBASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Grik1-210ENSMUST00000228034 2708 ntBASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Snhg11-201ENSMUST00000109488 5864 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Gm23750-201ENSMUST00000104222 132 ntBASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Gm15741-201ENSMUST00000119401 754 ntBASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Gm14294-201ENSMUST00000119749 751 ntBASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Gm43160-201ENSMUST00000196453 421 ntBASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Igkv4-83-201ENSMUST00000196933 334 ntBASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 CR974429.2-201ENSMUST00000221883 1696 ntBASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a3E9PWQ3 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a3E9PWQ3 Luc7l-202ENSMUST00000114976 4934 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a3E9PWQ3 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a3E9PWQ3 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a3E9PWQ3 D5Ertd579e-201ENSMUST00000031091 6677 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Col6a3E9PWQ3 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a3E9PWQ3 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Col6a3E9PWQ3 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a3E9PWQ3 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a3E9PWQ3 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Col6a3E9PWQ3 AC134860.3-201ENSMUST00000223564 1300 ntBASIC6.2□□□□□ -1.42
Col6a3E9PWQ3 Rian-209ENSMUST00000182406 3476 ntBASIC6.2□□□□□ -1.42
Col6a3E9PWQ3 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a3E9PWQ3 Gm37648-201ENSMUST00000192072 2563 ntBASIC6.2□□□□□ -1.42
Col6a3E9PWQ3 Pcdhga2-201ENSMUST00000193869 4689 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a3E9PWQ3 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Col6a3E9PWQ3 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a3E9PWQ3 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a3E9PWQ3 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a3E9PWQ3 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC6.2□□□□□ -1.42
Col6a3E9PWQ3 Gm28081-201ENSMUST00000185321 1497 ntTSL 5 BASIC6.2□□□□□ -1.42
Col6a3E9PWQ3 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC6.2□□□□□ -1.42
Col6a3E9PWQ3 Gm29473-201ENSMUST00000185588 1497 ntTSL 5 BASIC6.2□□□□□ -1.42
Col6a3E9PWQ3 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC6.2□□□□□ -1.42
Col6a3E9PWQ3 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC6.2□□□□□ -1.42
Col6a3E9PWQ3 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC6.2□□□□□ -1.42
Col6a3E9PWQ3 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC6.2□□□□□ -1.42
Col6a3E9PWQ3 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC6.2□□□□□ -1.42
Col6a3E9PWQ3 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC6.2□□□□□ -1.42
Col6a3E9PWQ3 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC6.2□□□□□ -1.42
Col6a3E9PWQ3 Gm28668-202ENSMUST00000186549 1499 ntTSL 5 BASIC6.2□□□□□ -1.42
Col6a3E9PWQ3 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC6.2□□□□□ -1.42
Col6a3E9PWQ3 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC6.2□□□□□ -1.42
Col6a3E9PWQ3 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC6.2□□□□□ -1.42
Col6a3E9PWQ3 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a3E9PWQ3 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms